1 HisKA#1
158-221 aa · 64 aa · 16.5% of protein
Raw token
HisKA:158:0.00000000000806:221:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
CON67_RS10825
Histidine kinase, Classic
Bacillus toyonensis · GCF_002550355
ClassHKTypeClassicLength388 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002550355#CON67_RS10825Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length388 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage173 / 388 aa (44.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa388 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
270-378 aa · 109 aa · 28.1% of protein
Raw token
HATPase_c:270:9.35e-22:378:111:109- Raw architecture: HisKA:158:0.00000000000806:221:64:64#HATPase_c:270:9.35e-22:378:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002550355::NZ_NVNZ01000024.1::G00025
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span52678-54517Genomic interval covered by the local TCS group.
Identifiers
Old locus tagCON67_10820RefSeq proteinWP_097957874.1
Context group ID
GCF_002550355::NZ_NVNZ01000024.1::G00025Context members
CON67_RS10820CON67_RS10825
Partner locus tags
CON67_RS10820CON67_RS10825
Partner old locus tags
CON67_10815CON67_10820
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_097957874.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCON67_RS10825Primary locus identifier stored in the genes table.
Old locus tagCON67_10820Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_NVNZ01000024.1Sequence record reported by the local genomic context database.
Genomic interval53 351-54 517 nt1 167 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span52 678-54 517 ntGCF_002550355::NZ_NVNZ01000024.1::G00025
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002550355::NZ_NVNZ01000024.1::G00025Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NVNZ01000024.1All displayed genes belong to this local TCS context.
Neighborhood span52 678-54 517 nt1 840 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
52 678 nt54 517 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
CON67_RS10820GCF_002550355#CON67_RS10820
RROmpR
52 678-53 373 nt · Forward (+)
CON67_RS10825GCF_002550355#CON67_RS10825
HKClassicCurrent focus
53 351-54 517 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002550355#CON67_RS10825The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2543988
Simplified PFAM architecture for HKOC_2543988
PFAM domain coverage: 172 / 388 aa (44.3%)
1 aa388 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[159-221] | HATPase_c[270-378]
- Domain count: 2
- Matched identifier: HKOC_2543988
- Positioned domains: HisKA 159-221 ; HATPase_c 270-378
Cluster members and taxonomy
Representative gene: GCF_002550355#CON67_RS10825
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 155 322 · GCF_002550355
AssemblyASM255035v1 · Scaffoldhaploid
Genome composition5 991 951 bp · 35,0% GCBacillus toyonensis
Signal transduction countsGenes 132 · HK 72 · RR 58CheA 1 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key