1 HisKA#1
142-209 aa · 68 aa · 18.4% of protein
Raw token
HisKA:142:0.00000000000208:209:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
B6F67_RS23115
Histidine kinase, Classic
Bacillus cereus · GCF_002196815
ClassHKTypeClassicLength369 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002196815#B6F67_RS23115Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length369 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage179 / 369 aa (48.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa369 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
254-364 aa · 111 aa · 30.1% of protein
Raw token
HATPase_c:254:6.31e-26:364:112:109- Raw architecture: HisKA:142:0.00000000000208:209:68:64#HATPase_c:254:6.31e-26:364:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002196815::NZ_NBBB01000017.1::G00021
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span31521-33321Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_002196815::NZ_NBBB01000017.1::G00021Context members
B6F67_RS23115B6F67_RS23120
Partner locus tags
B6F67_RS23115B6F67_RS23120
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_088232721.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagB6F67_RS23115Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_NBBB01000017.1Sequence record reported by the local genomic context database.
Genomic interval31 521-32 630 nt1 110 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span31 521-33 321 ntGCF_002196815::NZ_NBBB01000017.1::G00021
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002196815::NZ_NBBB01000017.1::G00021Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NBBB01000017.1All displayed genes belong to this local TCS context.
Neighborhood span31 521-33 321 nt1 801 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
31 521 nt33 321 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
B6F67_RS23115GCF_002196815#B6F67_RS23115
HKClassicCurrent focus
31 521-32 630 nt · Reverse (-)
B6F67_RS23120GCF_002196815#B6F67_RS23120
RROmpR
32 623-33 321 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002196815#B6F67_RS23115The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2692388
Simplified PFAM architecture for HKOC_2692388
PFAM domain coverage: 177 / 369 aa (48.0%)
1 aa369 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[143-208] | HATPase_c[254-364]
- Domain count: 2
- Matched identifier: HKOC_2692388
- Positioned domains: HisKA 143-208 ; HATPase_c 254-364
Cluster members and taxonomy
Representative gene: GCF_002196815#B6F67_RS23115
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_002196815
AssemblyASM219681v1 · Scaffoldhaploid
Genome composition5 269 088 bp · 35,5% GCBacillus cereus
Signal transduction countsGenes 100 · HK 55 · RR 45CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key