1 HisKA_3#1
177-244 aa · 68 aa · 18.6% of protein
Raw token
HisKA_3:177:5.26e-19:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BW897_RS01805
Histidine kinase, Classic
Bacillus cereus · GCF_002014585
ClassHKTypeClassicLength366 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002014585#BW897_RS01805Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length366 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 366 aa (39.6%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Biotite-like viewServer-side Python rendering inspired by the Biotite sigma-domain example.
Domain-by-domain annotation2 items
2 HATPase_c#2
289-365 aa · 77 aa · 21.0% of protein
Raw token
HATPase_c:289:0.000000000123:365:97:109- Raw architecture: HisKA_3:177:5.26e-19:244:68:68#HATPase_c:289:0.000000000123:365:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002014585::NZ_MUAJ01000001.1::G00018
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span334928-336671Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBW897_01800RefSeq proteinWP_078204424.1
Context group ID
GCF_002014585::NZ_MUAJ01000001.1::G00018Context members
BW897_RS01800BW897_RS01805
Partner locus tags
BW897_RS01800BW897_RS01805
Partner old locus tags
BW897_01795BW897_01800
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_078204424.1Primary protein accession used for annex mappings.
UniProt accessionA0A1S9TXK4Primary UniProt accession resolved in the annex database.
UniProt IDA0A1S9TXK4_BACCEDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBW897_RS01805Primary locus identifier stored in the genes table.
Old locus tagBW897_01800Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MUAJ01000001.1Sequence record reported by the local genomic context database.
Genomic interval335 571-336 671 nt1 101 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span334 928-336 671 ntGCF_002014585::NZ_MUAJ01000001.1::G00018
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002014585::NZ_MUAJ01000001.1::G00018Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MUAJ01000001.1All displayed genes belong to this local TCS context.
Neighborhood span334 928-336 671 nt1 744 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
334 928 nt336 671 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BW897_RS01800GCF_002014585#BW897_RS01800
RRNarL
334 928-335 566 nt · Forward (+)
BW897_RS01805GCF_002014585#BW897_RS01805
HKClassicCurrent focus
335 571-336 671 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002014655#BLX04_RS03545Use this link to inspect the representative gene detail.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2635333
Simplified PFAM architecture for HKOC_2635333
PFAM domain coverage: 146 / 377 aa (38.7%)
1 aa377 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[177-243] | HATPase_c[289-367]
- Domain count: 2
- Matched identifier: HKOC_2635333
- Positioned domains: HisKA_3 177-243 ; HATPase_c 289-367
Cluster members and taxonomy
Representative gene: GCF_002014655#BLX04_RS03545
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_002014585
AssemblyASM201458v1 · Contighaploid
Genome composition6 248 992 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 125 · HK 68 · RR 57CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key