1 HisKA_3#1
67-134 aa · 68 aa · 24.9% of protein
Raw token
HisKA_3:67:7.04e-17:134:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BW891_RS09725
Histidine kinase, Classic
Bacillus mycoides · GCF_002014545
ClassHKTypeClassicLength273 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002014545#BW891_RS09725Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length273 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 273 aa (56.8%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa273 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
177-263 aa · 87 aa · 31.9% of protein
Raw token
HATPase_c:177:0.00000000000000805:263:100:109- Raw architecture: HisKA_3:67:7.04e-17:134:68:68#HATPase_c:177:0.00000000000000805:263:100:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002014545::NZ_MUAK01000014.1::G00022
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span86347-87803Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBW891_09705RefSeq proteinWP_078178153.1
Context group ID
GCF_002014545::NZ_MUAK01000014.1::G00022Context members
BW891_RS09720BW891_RS09725
Partner locus tags
BW891_RS09720BW891_RS09725
Partner old locus tags
BW891_09700BW891_09705
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_078178153.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBW891_RS09725Primary locus identifier stored in the genes table.
Old locus tagBW891_09705Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MUAK01000014.1Sequence record reported by the local genomic context database.
Genomic interval86 981-87 803 nt823 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span86 347-87 803 ntGCF_002014545::NZ_MUAK01000014.1::G00022
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002014545::NZ_MUAK01000014.1::G00022Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MUAK01000014.1All displayed genes belong to this local TCS context.
Neighborhood span86 347-87 803 nt1 457 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
86 347 nt87 803 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BW891_RS09720GCF_002014545#BW891_RS09720
RRNarL
86 347-86 991 nt · Reverse (-)
BW891_RS09725GCF_002014545#BW891_RS09725
HKClassicCurrent focus
86 981-87 803 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000003925#BMYCO0001_RS04545Use this link to inspect the representative gene detail.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2397554
Simplified PFAM architecture for HKOC_2397554
PFAM domain coverage: 157 / 405 aa (38.8%)
1 aa405 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[199-265] | HATPase_c[307-396]
- Domain count: 2
- Matched identifier: HKOC_2397554
- Positioned domains: HisKA_3 199-265 ; HATPase_c 307-396
Cluster members and taxonomy
Representative gene: GCF_000003925#BMYCO0001_RS04545
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_002014545
AssemblyASM201454v1 · Contighaploid
Genome composition5 641 761 bp · 35,5% GCBacillus mycoides
Signal transduction countsGenes 139 · HK 73 · RR 65CheA 1 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key