1 HisKA#1
323-381 aa · 59 aa · 10.8% of protein
Raw token
HisKA:323:0.00000000033:381:59:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BW891_RS09265
Histidine kinase, Classic
Bacillus mycoides · GCF_002014545
ClassHKTypeClassicLength547 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_002014545#BW891_RS09265Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length547 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage167 / 547 aa (30.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa547 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
438-545 aa · 108 aa · 19.7% of protein
Raw token
HATPase_c:438:3.44e-31:545:108:109- Raw architecture: HisKA:323:0.00000000033:381:59:64#HATPase_c:438:3.44e-31:545:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_002014545::NZ_MUAK01000014.1::G00021
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span1-1644Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBW891_09245RefSeq proteinWP_142253399.1
Context group ID
GCF_002014545::NZ_MUAK01000014.1::G00021Context members
BW891_RS09265
Partner locus tags
BW891_RS09265
Partner old locus tags
BW891_09245
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_142253399.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBW891_RS09265Primary locus identifier stored in the genes table.
Old locus tagBW891_09245Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MUAK01000014.1Sequence record reported by the local genomic context database.
Genomic interval1-1 644 nt1 644 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1-1 644 ntGCF_002014545::NZ_MUAK01000014.1::G00021
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002014545::NZ_MUAK01000014.1::G00021Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MUAK01000014.1All displayed genes belong to this local TCS context.
Neighborhood span1-1 644 nt1 644 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 nt1 644 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
BW891_RS09265GCF_002014545#BW891_RS09265
HKClassicCurrent focus
1-1 644 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_008042285#DN408_RS03800Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1163688
Simplified PFAM architecture for HKOC_1163688
PFAM domain coverage: 167 / 580 aa (28.8%)
1 aa580 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[356-414] | HATPase_c[471-578]
- Domain count: 2
- Matched identifier: HKOC_1163688
- Positioned domains: HisKA 356-414 ; HATPase_c 471-578
Cluster members and taxonomy
Representative gene: GCF_008042285#DN408_RS03800
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_002014545
AssemblyASM201454v1 · Contighaploid
Genome composition5 641 761 bp · 35,5% GCBacillus mycoides
Signal transduction countsGenes 139 · HK 73 · RR 65CheA 1 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key