1 HisKA_3#1
177-244 aa · 68 aa · 18.6% of protein
Raw token
HisKA_3:177:1.71e-19:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BJR06_RS17835
Histidine kinase, Classic
Bacillus cereus · GCF_001901245
ClassHKTypeClassicLength366 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001901245#BJR06_RS17835Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length366 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 366 aa (39.6%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa366 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
289-365 aa · 77 aa · 21.0% of protein
Raw token
HATPase_c:289:0.000000000227:365:97:109- Raw architecture: HisKA_3:177:1.71e-19:244:68:68#HATPase_c:289:0.000000000227:365:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001901245::NZ_MPOM01000006.1::G00056
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span208199-209942Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBJR06_17375RefSeq proteinWP_073517914.1
Context group ID
GCF_001901245::NZ_MPOM01000006.1::G00056Context members
BJR06_RS17835BJR06_RS17840
Partner locus tags
BJR06_RS17835BJR06_RS17840
Partner old locus tags
BJR06_17375BJR06_17380
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_073517914.1Primary protein accession used for annex mappings.
UniProt accessionA0ABV4RTZ4Primary UniProt accession resolved in the annex database.
UniProt IDA0ABV4RTZ4_9BACIDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBJR06_RS17835Primary locus identifier stored in the genes table.
Old locus tagBJR06_17375Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MPOM01000006.1Sequence record reported by the local genomic context database.
Genomic interval208 199-209 299 nt1 101 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span208 199-209 942 ntGCF_001901245::NZ_MPOM01000006.1::G00056
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001901245::NZ_MPOM01000006.1::G00056Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MPOM01000006.1All displayed genes belong to this local TCS context.
Neighborhood span208 199-209 942 nt1 744 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
208 199 nt209 942 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BJR06_RS17835GCF_001901245#BJR06_RS17835
HKClassicCurrent focus
208 199-209 299 nt · Reverse (-)
BJR06_RS17840GCF_001901245#BJR06_RS17840
RRNarL
209 304-209 942 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001901245#BJR06_RS17835The current gene is the representative for this cluster.
PFAM architectureHisKA_31 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2712941
Simplified PFAM architecture for HKOC_2712941
PFAM domain coverage: 67 / 366 aa (18.3%)
1 aa366 aa
HisKA_3
- Simplified architecture: HisKA_3
- Raw architecture: HisKA_3[177-243]
- Domain count: 1
- Matched identifier: HKOC_2712941
- Positioned domains: HisKA_3 177-243
Cluster members and taxonomy
Representative gene: GCF_001901245#BJR06_RS17835
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_001901245
AssemblyASM190124v1 · Contighaploid
Genome composition5 926 588 bp · 35,5% GCBacillus cereus
Signal transduction countsGenes 111 · HK 59 · RR 52CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key