1 HisKA#1
85-152 aa · 68 aa · 21.9% of protein
Raw token
HisKA:85:0.00000000000000691:152:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BJR06_RS04110
Histidine kinase, Classic
Bacillus cereus · GCF_001901245
ClassHKTypeClassicLength311 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001901245#BJR06_RS04110Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length311 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 311 aa (57.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa311 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
198-307 aa · 110 aa · 35.4% of protein
Raw token
HATPase_c:198:1.25e-26:307:110:109- Raw architecture: HisKA:85:0.00000000000000691:152:68:64#HATPase_c:198:1.25e-26:307:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001901245::NZ_MPOM01000002.1::G00025
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span340502-342134Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBJR06_04025RefSeq proteinWP_073516659.1
Context group ID
GCF_001901245::NZ_MPOM01000002.1::G00025Context members
BJR06_RS04105BJR06_RS04110
Partner locus tags
BJR06_RS04105BJR06_RS04110
Partner old locus tags
BJR06_04020BJR06_04025
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_073516659.1Primary protein accession used for annex mappings.
UniProt accessionA0ABV4S1L3Primary UniProt accession resolved in the annex database.
UniProt IDA0ABV4S1L3_9BACIDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBJR06_RS04110Primary locus identifier stored in the genes table.
Old locus tagBJR06_04025Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MPOM01000002.1Sequence record reported by the local genomic context database.
Genomic interval341 199-342 134 nt936 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span340 502-342 134 ntGCF_001901245::NZ_MPOM01000002.1::G00025
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001901245::NZ_MPOM01000002.1::G00025Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MPOM01000002.1All displayed genes belong to this local TCS context.
Neighborhood span340 502-342 134 nt1 633 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
340 502 nt342 134 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BJR06_RS04105GCF_001901245#BJR06_RS04105
RROmpR
340 502-341 197 nt · Forward (+)
BJR06_RS04110GCF_001901245#BJR06_RS04110
HKClassicCurrent focus
341 199-342 134 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001901245#BJR06_RS04110The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2876797
Simplified PFAM architecture for HKOC_2876797
PFAM domain coverage: 174 / 311 aa (55.9%)
1 aa311 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[86-152] | HATPase_c[201-307]
- Domain count: 2
- Matched identifier: HKOC_2876797
- Positioned domains: HisKA 86-152 ; HATPase_c 201-307
Cluster members and taxonomy
Representative gene: GCF_001901245#BJR06_RS04110
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_001901245
AssemblyASM190124v1 · Contighaploid
Genome composition5 926 588 bp · 35,5% GCBacillus cereus
Signal transduction countsGenes 111 · HK 59 · RR 52CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key