1 HisKA#1
108-175 aa · 68 aa · 20.2% of protein
Raw token
HisKA:108:3.77e-16:175:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BWGOE5_RS01400
Histidine kinase, Classic
Bacillus mycoides · GCF_001855755
ClassHKTypeClassicLength337 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001855755#BWGOE5_RS01400Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length337 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 337 aa (52.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa337 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
221-330 aa · 110 aa · 32.6% of protein
Raw token
HATPase_c:221:6.64e-28:330:110:109- Raw architecture: HisKA:108:3.77e-16:175:68:64#HATPase_c:221:6.64e-28:330:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001855755::NZ_LXLQ01000007.1::G00002
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span4692-6408Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBWGOE5_02770RefSeq proteinWP_002113464.1
Context group ID
GCF_001855755::NZ_LXLQ01000007.1::G00002Context members
BWGOE5_RS01400BWGOE5_RS01405
Partner locus tags
BWGOE5_RS01400BWGOE5_RS01405
Partner old locus tags
BWGOE5_02770BWGOE5_02780
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_002113464.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBWGOE5_RS01400Primary locus identifier stored in the genes table.
Old locus tagBWGOE5_02770Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LXLQ01000007.1Sequence record reported by the local genomic context database.
Genomic interval4 692-5 705 nt1 014 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span4 692-6 408 ntGCF_001855755::NZ_LXLQ01000007.1::G00002
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001855755::NZ_LXLQ01000007.1::G00002Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LXLQ01000007.1All displayed genes belong to this local TCS context.
Neighborhood span4 692-6 408 nt1 717 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
4 692 nt6 408 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BWGOE5_RS01400GCF_001855755#BWGOE5_RS01400
HKClassicCurrent focus
4 692-5 705 nt · Reverse (-)
BWGOE5_RS01405GCF_001855755#BWGOE5_RS01405
RROmpR
5 695-6 408 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000293545#IEM_RS22800Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2844372
Simplified PFAM architecture for HKOC_2844372
PFAM domain coverage: 177 / 337 aa (52.5%)
1 aa337 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[108-174] | HATPase_c[222-331]
- Domain count: 2
- Matched identifier: HKOC_2844372
- Positioned domains: HisKA 108-174 ; HATPase_c 222-331
Cluster members and taxonomy
Representative gene: GCF_000293545#IEM_RS22800
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_001855755
AssemblyASM185575v1 · Contighaploid
Genome composition5 589 181 bp · 35,5% GCBacillus mycoides
Signal transduction countsGenes 114 · HK 63 · RR 51CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key