1 HisKA#1
186-253 aa · 68 aa · 16.5% of protein
Raw token
HisKA:186:0.0000000000000222:253:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BWGOE11_RS03025
Histidine kinase, Classic
Bacillus mycoides · GCF_001757905
ClassHKTypeClassicLength411 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001757905#BWGOE11_RS03025Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length411 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage180 / 411 aa (43.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa411 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
298-409 aa · 112 aa · 27.3% of protein
Raw token
HATPase_c:298:5.82e-29:409:112:109- Raw architecture: HisKA:186:0.0000000000000222:253:68:64#HATPase_c:298:5.82e-29:409:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001757905::NZ_LXLX01000013.1::G00007
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span31881-33799Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBWGOE11_06000RefSeq proteinWP_070146178.1
Context group ID
GCF_001757905::NZ_LXLX01000013.1::G00007Context members
BWGOE11_RS03020BWGOE11_RS03025
Partner locus tags
BWGOE11_RS03020BWGOE11_RS03025
Partner old locus tags
BWGOE11_05990BWGOE11_06000
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_070146178.1Primary protein accession used for annex mappings.
UniProt accessionA0A1E8BU14Primary UniProt accession resolved in the annex database.
UniProt IDA0A1E8BU14_BACMYDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBWGOE11_RS03025Primary locus identifier stored in the genes table.
Old locus tagBWGOE11_06000Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LXLX01000013.1Sequence record reported by the local genomic context database.
Genomic interval32 564-33 799 nt1 236 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span31 881-33 799 ntGCF_001757905::NZ_LXLX01000013.1::G00007
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001757905::NZ_LXLX01000013.1::G00007Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LXLX01000013.1All displayed genes belong to this local TCS context.
Neighborhood span31 881-33 799 nt1 919 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
31 881 nt33 799 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BWGOE11_RS03020GCF_001757905#BWGOE11_RS03020
RROmpR
31 881-32 552 nt · Forward (+)
BWGOE11_RS03025GCF_001757905#BWGOE11_RS03025
HKClassicCurrent focus
32 564-33 799 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001758015#BWGOE13_RS02845Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2303201
Simplified PFAM architecture for HKOC_2303201
PFAM domain coverage: 177 / 416 aa (42.5%)
1 aa416 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[192-257] | HATPase_c[303-413]
- Domain count: 2
- Matched identifier: HKOC_2303201
- Positioned domains: HisKA 192-257 ; HATPase_c 303-413
Cluster members and taxonomy
Representative gene: GCF_001758015#BWGOE13_RS02845
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_001757905
AssemblyASM175790v1 · Contighaploid
Genome composition5 625 374 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 113 · HK 62 · RR 51CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key