1 HisKA_3#1
194-258 aa · 65 aa · 16.4% of protein
Raw token
HisKA_3:194:4.77e-20:258:65:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BWGOE9_RS01085
Histidine kinase, Classic
Bacillus mycoides · GCF_001757845
ClassHKTypeClassicLength397 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001757845#BWGOE9_RS01085Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length397 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage151 / 397 aa (38.0%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa397 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
303-388 aa · 86 aa · 21.7% of protein
Raw token
HATPase_c:303:9.73e-17:388:104:109- Raw architecture: HisKA_3:194:4.77e-20:258:65:68#HATPase_c:303:9.73e-17:388:104:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001757845::NZ_LXLU01000004.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span59146-60992Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBWGOE9_02120RefSeq proteinWP_070140591.1
Context group ID
GCF_001757845::NZ_LXLU01000004.1::G00001Context members
BWGOE9_RS01085BWGOE9_RS01090
Partner locus tags
BWGOE9_RS01085BWGOE9_RS01090
Partner old locus tags
BWGOE9_02120BWGOE9_02130
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_070140591.1Primary protein accession used for annex mappings.
UniProt accessionA0A1E8BE13Primary UniProt accession resolved in the annex database.
UniProt IDA0A1E8BE13_BACMYDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBWGOE9_RS01085Primary locus identifier stored in the genes table.
Old locus tagBWGOE9_02120Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LXLU01000004.1Sequence record reported by the local genomic context database.
Genomic interval59 146-60 339 nt1 194 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span59 146-60 992 ntGCF_001757845::NZ_LXLU01000004.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001757845::NZ_LXLU01000004.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LXLU01000004.1All displayed genes belong to this local TCS context.
Neighborhood span59 146-60 992 nt1 847 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
59 146 nt60 992 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BWGOE9_RS01085GCF_001757845#BWGOE9_RS01085
HKClassicCurrent focus
59 146-60 339 nt · Forward (+)
BWGOE9_RS01090GCF_001757845#BWGOE9_RS01090
RRNarL
60 336-60 992 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001757835#BWGOE8_RS01085Use this link to inspect the representative gene detail.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2470826
Simplified PFAM architecture for HKOC_2470826
PFAM domain coverage: 152 / 397 aa (38.3%)
1 aa397 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[194-259] | HATPase_c[302-387]
- Domain count: 2
- Matched identifier: HKOC_2470826
- Positioned domains: HisKA_3 194-259 ; HATPase_c 302-387
Cluster members and taxonomy
Representative gene: GCF_001757835#BWGOE8_RS01085
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_001757845
AssemblyASM175784v1 · Contighaploid
Genome composition5 846 892 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 120 · HK 67 · RR 53CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key