1 HisKA#1
258-324 aa · 67 aa · 14.0% of protein
Raw token
HisKA:258:0.000000000486:324:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BWGOE1_RS24760
Histidine kinase, Classic
Bacillus mycoides · GCF_001757785
ClassHKTypeClassicLength480 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001757785#BWGOE1_RS24760Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length480 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 480 aa (37.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa480 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
369-479 aa · 111 aa · 23.1% of protein
Raw token
HATPase_c:369:1.18e-20:479:112:109- Raw architecture: HisKA:258:0.000000000486:324:67:64#HATPase_c:369:1.18e-20:479:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001757785::NZ_LXLM01000048.1::G00058
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span113077-115162Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBWGOE1_50270RefSeq proteinWP_070129142.1
Context group ID
GCF_001757785::NZ_LXLM01000048.1::G00058Context members
BWGOE1_RS24755BWGOE1_RS24760
Partner locus tags
BWGOE1_RS24755BWGOE1_RS24760
Partner old locus tags
BWGOE1_50260BWGOE1_50270
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_070129142.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBWGOE1_RS24760Primary locus identifier stored in the genes table.
Old locus tagBWGOE1_50270Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LXLM01000048.1Sequence record reported by the local genomic context database.
Genomic interval113 720-115 162 nt1 443 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span113 077-115 162 ntGCF_001757785::NZ_LXLM01000048.1::G00058
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001757785::NZ_LXLM01000048.1::G00058Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LXLM01000048.1All displayed genes belong to this local TCS context.
Neighborhood span113 077-115 162 nt2 086 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
113 077 nt115 162 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BWGOE1_RS24755GCF_001757785#BWGOE1_RS24755
RROmpR
113 077-113 742 nt · Forward (+)
BWGOE1_RS24760GCF_001757785#BWGOE1_RS24760
HKClassicCurrent focus
113 720-115 162 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001757785#BWGOE1_RS24760The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1620603
Simplified PFAM architecture for HKOC_1620603
PFAM domain coverage: 174 / 480 aa (36.3%)
1 aa480 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[259-323] | HATPase_c[370-478]
- Domain count: 2
- Matched identifier: HKOC_1620603
- Positioned domains: HisKA 259-323 ; HATPase_c 370-478
Cluster members and taxonomy
Representative gene: GCF_001757785#BWGOE1_RS24760
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_001757785
AssemblyASM175778v1 · Contighaploid
Genome composition5 613 531 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 116 · HK 64 · RR 52CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key