1 HisKA#1
124-170 aa · 47 aa · 14.4% of protein
Raw token
HisKA:124:0.00000961:170:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BWGOE1_RS13030
Histidine kinase, Classic
Bacillus mycoides · GCF_001757785
ClassHKTypeClassicLength327 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001757785#BWGOE1_RS13030Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length327 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 327 aa (47.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa327 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
217-324 aa · 108 aa · 33.0% of protein
Raw token
HATPase_c:217:1.24e-26:324:108:109- Raw architecture: HisKA:124:0.00000961:170:53:64#HATPase_c:217:1.24e-26:324:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001757785::NZ_LXLM01000032.1::G00037
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span10191-11878Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBWGOE1_26510RefSeq proteinWP_002110227.1
Context group ID
GCF_001757785::NZ_LXLM01000032.1::G00037Context members
BWGOE1_RS13030BWGOE1_RS13035
Partner locus tags
BWGOE1_RS13030BWGOE1_RS13035
Partner old locus tags
BWGOE1_26510BWGOE1_26520
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002110227.1Primary protein accession used for annex mappings.
UniProt accessionA0A1D3MMF8Primary UniProt accession resolved in the annex database.
UniProt IDA0A1D3MMF8_BACMYDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBWGOE1_RS13030Primary locus identifier stored in the genes table.
Old locus tagBWGOE1_26510Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LXLM01000032.1Sequence record reported by the local genomic context database.
Genomic interval10 191-11 174 nt984 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span10 191-11 878 ntGCF_001757785::NZ_LXLM01000032.1::G00037
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001757785::NZ_LXLM01000032.1::G00037Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LXLM01000032.1All displayed genes belong to this local TCS context.
Neighborhood span10 191-11 878 nt1 688 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
10 191 nt11 878 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BWGOE1_RS13030GCF_001757785#BWGOE1_RS13030
HKClassicCurrent focus
10 191-11 174 nt · Reverse (-)
BWGOE1_RS13035GCF_001757785#BWGOE1_RS13035
RROmpR
11 171-11 878 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000293545#IEM_RS01565Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2861328
Simplified PFAM architecture for HKOC_2861328
PFAM domain coverage: 107 / 327 aa (32.7%)
1 aa327 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[217-323]
- Domain count: 1
- Matched identifier: HKOC_2861328
- Positioned domains: HATPase_c 217-323
Cluster members and taxonomy
Representative gene: GCF_000293545#IEM_RS01565
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 405 · GCF_001757785
AssemblyASM175778v1 · Contighaploid
Genome composition5 613 531 bp · 35,0% GCBacillus mycoides
Signal transduction countsGenes 116 · HK 64 · RR 52CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key