1 HAMP#1
144-211 aa · 68 aa · 23.1% of protein
Raw token
HAMP:144:0.00000256:211:70:69P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
A7D18_RS02370
Probable incomplete histidine kinase
Enterococcus faecalis · GCF_001639005
ClassHKTypeClassicLength294 aaTM0ValidatedNoCompleteNoContextNo local context
Gene IDGCF_001639005#A7D18_RS02370Stable P2CS identifier used across views.
GenomeGCF_001639005Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Selected clusterNo clusterThis gene is not linked to a local CD-HIT cluster.
External referencesMIST4 A7D18_RS02370MIST4
Domain signature
Compact overview inferred from the domain field
HAMPHisKA
Protein length294 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage126 / 294 aa (42.9%)Merged over positioned domains only.
Domain description1 HAMP,1 HisKASummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa294 aa
Domain-by-domain annotation2 items
2 HisKA#2
232-289 aa · 58 aa · 19.7% of protein
Raw token
HisKA:232:0.0000167:289:58:64- Raw architecture: HAMP:144:0.00000256:211:70:69#HisKA:232:0.0000167:289:58:64
- Domain description: 1 HAMP,1 HisKA
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: No
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
No local TCS context mapping is available for this gene.
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No external UniProt / GO / PubMed mapping is available for this gene.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagA7D18_RS02370Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconUnavailableNo contig or replicon mapping is available for this gene.
Genomic intervalUnavailableNo start/end genomic coordinates are available for this gene.
StrandUnavailableStrand sign follows the local context database convention.
Local TCS group spanUnavailableNo grouped neighborhood span is available for this gene.
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
No local TCS neighborhood is available for this gene on this server.
Clusters
CD-HIT memberships and selected cluster details for the current gene class
No cluster membership available for this gene.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 351 · GCF_001639005
AssemblyASM163900v2 · Scaffoldhaploid
Genome composition3 039 735 bp · 37,5% GCEnterococcus faecalis
Signal transduction countsGenes 31 · HK 14 · RR 17CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyEnterococcaceaeGenusEnterococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Enterococcaceae7Enterococcus
Related genes
Preview from the same derived genome key