1 HisKA#1
156-219 aa · 64 aa · 16.6% of protein
Raw token
HisKA:156:0.00000000000885:219:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
WR51_RS17415
Histidine kinase, Classic
Bacillus cereus · GCF_001635955
ClassHKTypeClassicLength386 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001635955#WR51_RS17415Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length386 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage173 / 386 aa (44.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa386 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
268-376 aa · 109 aa · 28.2% of protein
Raw token
HATPase_c:268:3.47e-24:376:111:109- Raw architecture: HisKA:156:0.00000000000885:219:64:64#HATPase_c:268:3.47e-24:376:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001635955::NZ_CP011153.1::G00043
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span3506311-3508156Genomic interval covered by the local TCS group.
Identifiers
Old locus tagWR51_17870RefSeq proteinWP_063548232.1
Context group ID
GCF_001635955::NZ_CP011153.1::G00043Context members
WR51_RS17415WR51_RS17420
Partner locus tags
WR51_RS17415WR51_RS17420
Partner old locus tags
WR51_17870WR51_17875
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_063548232.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagWR51_RS17415Primary locus identifier stored in the genes table.
Old locus tagWR51_17870Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP011153.1Sequence record reported by the local genomic context database.
Genomic interval3 506 311-3 507 471 nt1 161 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span3 506 311-3 508 156 ntGCF_001635955::NZ_CP011153.1::G00043
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001635955::NZ_CP011153.1::G00043Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP011153.1All displayed genes belong to this local TCS context.
Neighborhood span3 506 311-3 508 156 nt1 846 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
3 506 311 nt3 508 156 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
WR51_RS17415GCF_001635955#WR51_RS17415
HKClassicCurrent focus
3 506 311-3 507 471 nt · Reverse (-)
WR51_RS17420GCF_001635955#WR51_RS17420
RROmpR
3 507 461-3 508 156 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001635915#WR47_RS17415Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2558455
Simplified PFAM architecture for HKOC_2558455
PFAM domain coverage: 172 / 386 aa (44.6%)
1 aa386 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[157-219] | HATPase_c[268-376]
- Domain count: 2
- Matched identifier: HKOC_2558455
- Positioned domains: HisKA 157-219 ; HATPase_c 268-376
Cluster members and taxonomy
Representative gene: GCF_001635915#WR47_RS17415
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_001635955
AssemblyASM163595v1 · Complete Genomehaploid
Genome composition6 097 988 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 118 · HK 64 · RR 54CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key