1 HisKA#1
228-294 aa · 67 aa · 14.8% of protein
Raw token
HisKA:228:0.00000000024:294:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ARA71_RS16540
Histidine kinase, Classic
Blautia wexlerae · GCF_001404735
ClassHKTypeClassicLength454 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001404735#ARA71_RS16540Stable P2CS identifier used across views.
GenomeGCF_001404735Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length454 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage176 / 454 aa (38.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa454 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
343-451 aa · 109 aa · 24.0% of protein
Raw token
HATPase_c:343:3.78e-21:451:109:109- Raw architecture: HisKA:228:0.00000000024:294:67:64#HATPase_c:343:3.78e-21:451:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001404735::NZ_CZAW01000047.1::G00061
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span6099-8169Genomic interval covered by the local TCS group.
Identifiers
Old locus tagERS852523_03355RefSeq proteinWP_025581232.1
Context group ID
GCF_001404735::NZ_CZAW01000047.1::G00061Context members
ARA71_RS16540ARA71_RS16545
Partner locus tags
ARA71_RS16540ARA71_RS16545
Partner old locus tags
ERS852523_03355ERS852523_03356
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_025581232.1Primary protein accession used for annex mappings.
UniProt accessionA0A174VN80Primary UniProt accession resolved in the annex database.
UniProt IDA0A174VN80_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagARA71_RS16540Primary locus identifier stored in the genes table.
Old locus tagERS852523_03355Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CZAW01000047.1Sequence record reported by the local genomic context database.
Genomic interval6 099-7 463 nt1 365 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span6 099-8 169 ntGCF_001404735::NZ_CZAW01000047.1::G00061
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001404735::NZ_CZAW01000047.1::G00061Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CZAW01000047.1All displayed genes belong to this local TCS context.
Neighborhood span6 099-8 169 nt2 071 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
6 099 nt8 169 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ARA71_RS16540GCF_001404735#ARA71_RS16540
HKClassicCurrent focus
6 099-7 463 nt · Reverse (-)
ARA71_RS16545GCF_001404735#ARA71_RS16545
RROmpR
7 468-8 169 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000484655#K316_RS0121695Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1912712
Simplified PFAM architecture for HKOC_1912712
PFAM domain coverage: 174 / 454 aa (38.3%)
1 aa454 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[229-293] | HATPase_c[343-451]
- Domain count: 2
- Matched identifier: HKOC_1912712
- Positioned domains: HisKA 229-293 ; HATPase_c 343-451
Cluster members and taxonomy
Representative gene: GCF_000484655#K316_RS0121695
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_001404735
Assembly14207_7#34 · Scaffoldhaploid
Genome composition4 829 031 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 174 · HK 87 · RR 86CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key