1 His_kinase#1
377-455 aa · 79 aa · 13.4% of protein
Raw token
His_kinase:377:1.58e-27:455:80:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ARA71_RS12880
Histidine kinase, Classic
Blautia wexlerae · GCF_001404735
ClassHKTypeClassicLength591 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001404735#ARA71_RS12880Stable P2CS identifier used across views.
GenomeGCF_001404735Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length591 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage188 / 591 aa (31.8%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa591 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
472-580 aa · 109 aa · 18.4% of protein
Raw token
HATPase_c:472:0.000000000289:580:111:109- Raw architecture: His_kinase:377:1.58e-27:455:80:80#HATPase_c:472:0.000000000289:580:111:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001404735::NZ_CZAW01000029.1::G00033
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span512-3839Genomic interval covered by the local TCS group.
Identifiers
Old locus tagERS852523_02614RefSeq proteinWP_025578048.1
Context group ID
GCF_001404735::NZ_CZAW01000029.1::G00033Context members
ARA71_RS12875ARA71_RS12880
Partner locus tags
ARA71_RS12875ARA71_RS12880
Partner old locus tags
ERS852523_02613ERS852523_02614
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_025578048.1Primary protein accession used for annex mappings.
UniProt accessionA0A174QQQ4Primary UniProt accession resolved in the annex database.
UniProt IDA0A174QQQ4_9FIRMDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagARA71_RS12880Primary locus identifier stored in the genes table.
Old locus tagERS852523_02614Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CZAW01000029.1Sequence record reported by the local genomic context database.
Genomic interval2 064-3 839 nt1 776 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span512-3 839 ntGCF_001404735::NZ_CZAW01000029.1::G00033
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001404735::NZ_CZAW01000029.1::G00033Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CZAW01000029.1All displayed genes belong to this local TCS context.
Neighborhood span512-3 839 nt3 328 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
512 nt3 839 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ARA71_RS12875GCF_001404735#ARA71_RS12875
RRunclassified
512-2 086 nt · Reverse (-)
ARA71_RS12880GCF_001404735#ARA71_RS12880
HKClassicCurrent focus
2 064-3 839 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000484655#K316_RS0106010Use this link to inspect the representative gene detail.
PFAM architectureHis_kinase + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1105413
Simplified PFAM architecture for HKOC_1105413
PFAM domain coverage: 185 / 591 aa (31.3%)
1 aa591 aa
His_kinaseHATPase_c
- Simplified architecture: His_kinase + HATPase_c
- Raw architecture: His_kinase[377-454] | HATPase_c[473-579]
- Domain count: 2
- Matched identifier: HKOC_1105413
- Positioned domains: His_kinase 377-454 ; HATPase_c 473-579
Cluster members and taxonomy
Representative gene: GCF_000484655#K316_RS0106010
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_001404735
Assembly14207_7#34 · Scaffoldhaploid
Genome composition4 829 031 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 174 · HK 87 · RR 86CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key