1 HisKA#1
14-76 aa · 63 aa · 27.8% of protein
Raw token
HisKA:14:0.0000000765:76:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ARA27_RS08290
Histidine kinase, Classic
Blautia obeum · GCF_001404455
ClassHKTypeClassicLength227 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_001404455#ARA27_RS08290Stable P2CS identifier used across views.
GenomeGCF_001404455Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length227 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage170 / 227 aa (74.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa227 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
120-226 aa · 107 aa · 47.1% of protein
Raw token
HATPase_c:120:3.68e-29:226:110:109- Raw architecture: HisKA:14:0.0000000765:76:63:64#HATPase_c:120:3.68e-29:226:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_001404455::NZ_CYZA01000007.1::G00017
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span125949-126632Genomic interval covered by the local TCS group.
Identifiers
Old locus tagERS852395_01696RefSeq proteinWP_008706975.1
Context group ID
GCF_001404455::NZ_CYZA01000007.1::G00017Context members
ARA27_RS08290
Partner locus tags
ARA27_RS08290
Partner old locus tags
ERS852395_01696
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_008706975.1Primary protein accession used for annex mappings.
UniProt accessionA0A174Q6K7Primary UniProt accession resolved in the annex database.
UniProt IDA0A174Q6K7_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagARA27_RS08290Primary locus identifier stored in the genes table.
Old locus tagERS852395_01696Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CYZA01000007.1Sequence record reported by the local genomic context database.
Genomic interval125 949-126 632 nt684 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span125 949-126 632 ntGCF_001404455::NZ_CYZA01000007.1::G00017
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001404455::NZ_CYZA01000007.1::G00017Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CYZA01000007.1All displayed genes belong to this local TCS context.
Neighborhood span125 949-126 632 nt684 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
125 949 nt126 632 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
ARA27_RS08290GCF_001404455#ARA27_RS08290
HKClassicCurrent focus
125 949-126 632 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000424085#G599_RS0104890Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2926740
Simplified PFAM architecture for HKOC_2926740
PFAM domain coverage: 106 / 227 aa (46.7%)
1 aa227 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[120-225]
- Domain count: 1
- Matched identifier: HKOC_2926740
- Positioned domains: HATPase_c 120-225
Cluster members and taxonomy
Representative gene: GCF_000424085#G599_RS0104890
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_001404455
Assembly13414_6#22 · Scaffoldhaploid
Genome composition3 731 704 bp · 41,0% GCBlautia obeum
Signal transduction countsGenes 75 · HK 36 · RR 37CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key