1 HisKA#1
234-298 aa · 65 aa · 14.3% of protein
Raw token
HisKA:234:0.0000000000423:298:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DH23_RS08935
Histidine kinase, Classic
Bacillus anthracis · GCF_000740925
ClassHKTypeClassicLength453 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000740925#DH23_RS08935Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length453 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage173 / 453 aa (38.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa453 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
344-451 aa · 108 aa · 23.8% of protein
Raw token
HATPase_c:344:3.96e-20:451:108:109- Raw architecture: HisKA:234:0.0000000000423:298:65:64#HATPase_c:344:3.96e-20:451:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000740925::NZ_MJAW01000011.1::G00013
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1079140-1081151Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDH23_06035RefSeq proteinWP_000416684.1
Context group ID
GCF_000740925::NZ_MJAW01000011.1::G00013Context members
DH23_RS08930DH23_RS08935
Partner locus tags
DH23_RS08930DH23_RS08935
Partner old locus tags
DH23_06030DH23_06035
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000416684.1Primary protein accession used for annex mappings.
UniProt accessionA0AAC8SG14Primary UniProt accession resolved in the annex database.
UniProt IDA0AAC8SG14_BACANDisplay identifier provided by UniProt.
GO / PubMed3 / 1Unique GO terms and literature references available below.
Reference hubs
GO terms
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDH23_RS08935Primary locus identifier stored in the genes table.
Old locus tagDH23_06035Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_MJAW01000011.1Sequence record reported by the local genomic context database.
Genomic interval1 079 790-1 081 151 nt1 362 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 079 140-1 081 151 ntGCF_000740925::NZ_MJAW01000011.1::G00013
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000740925::NZ_MJAW01000011.1::G00013Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_MJAW01000011.1All displayed genes belong to this local TCS context.
Neighborhood span1 079 140-1 081 151 nt2 012 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 079 140 nt1 081 151 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DH23_RS08930GCF_000740925#DH23_RS08930
RROmpR
1 079 140-1 079 802 nt · Forward (+)
DH23_RS08935GCF_000740925#DH23_RS08935
HKClassicCurrent focus
1 079 790-1 081 151 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000007845#BA_RS18305Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1925004
Simplified PFAM architecture for HKOC_1925004
PFAM domain coverage: 172 / 453 aa (38.0%)
1 aa453 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[234-297] | HATPase_c[344-451]
- Domain count: 2
- Matched identifier: HKOC_1925004
- Positioned domains: HisKA 234-297 ; HATPase_c 344-451
Cluster members and taxonomy
Representative gene: GCF_000007845#BA_RS18305
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 392 · GCF_000740925
AssemblyASM74092v2 · Scaffoldhaploid
Genome composition5 361 934 bp · 35,0% GCBacillus anthracis
Signal transduction countsGenes 96 · HK 46 · RR 49CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key