1 H-kinase_dim#1
98-157 aa · 60 aa · 12.5% of protein
Raw token
H-kinase_dim:98:0.0000000022:157:67:67P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DC25_RS08120
Histidine kinase, CheA
Bacillus anthracis · GCF_000697515
ClassHKTypeCheALength481 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000697515#DC25_RS08120Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
H-kinase_dimHATPase_cCheW
Protein length481 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage333 / 481 aa (69.2%)Merged over positioned domains only.
Domain description1 H-kinase_dim,1 HATPase_c,1 CheWSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa481 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
205-344 aa · 140 aa · 29.1% of protein
Raw token
HATPase_c:205:2.27e-17:344:140:1093 CheW#3
349-481 aa · 133 aa · 27.7% of protein
Raw token
CheW:349:5.79e-22:481:139:138- Raw architecture: H-kinase_dim:98:0.0000000022:157:67:67#HATPase_c:205:2.27e-17:344:140:109#CheW:349:5.79e-22:481:139:138
- Domain description: 1 H-kinase_dim,1 HATPase_c,1 CheW
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000697515::NZ_JHCB02000012.1::G00018
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span385805-387250Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_000697515::NZ_JHCB02000012.1::G00018Context members
DC25_RS08120
Partner locus tags
DC25_RS08120
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_371834558.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDC25_RS08120Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JHCB02000012.1Sequence record reported by the local genomic context database.
Genomic interval385 805-387 250 nt1 446 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span385 805-387 250 ntGCF_000697515::NZ_JHCB02000012.1::G00018
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000697515::NZ_JHCB02000012.1::G00018Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JHCB02000012.1All displayed genes belong to this local TCS context.
Neighborhood span385 805-387 250 nt1 446 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
385 805 nt387 250 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DC25_RS08120GCF_000697515#DC25_RS08120
HKCheACurrent focus
385 805-387 250 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000697515#DC25_RS08120The current gene is the representative for this cluster.
PFAM architectureP2 + H-kinase_dim + HATPase_c + CheW4 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1611885
Simplified PFAM architecture for HKOC_1611885
PFAM domain coverage: 369 / 481 aa (76.7%)
1 aa481 aa
P2H-kinase_dimHATPase_cCheW
- Simplified architecture: P2 + H-kinase_dim + HATPase_c + CheW
- Raw architecture: P2[2-39] | H-kinase_dim[98-156] | HATPase_c[205-344] | CheW[350-481]
- Domain count: 4
- Matched identifier: HKOC_1611885
- Positioned domains: P2 2-39 ; H-kinase_dim 98-156 ; HATPase_c 205-344 ; CheW 350-481
Cluster members and taxonomy
Representative gene: GCF_000697515#DC25_RS08120
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 392 · GCF_000697515
AssemblyASM69751v2 · Scaffoldhaploid
Genome composition5 440 708 bp · 35,0% GCBacillus anthracis
Signal transduction countsGenes 96 · HK 47 · RR 47CheA 1 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key