1 His_kinase#1
377-455 aa · 79 aa · 13.4% of protein
Raw token
His_kinase:377:1.58e-27:455:80:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
K316_RS0106010
Histidine kinase, Classic
Blautia wexlerae DSM 19850 · GCF_000484655
ClassHKTypeClassicLength591 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000484655#K316_RS0106010Stable P2CS identifier used across views.
GenomeGCF_000484655Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length591 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage188 / 591 aa (31.8%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa591 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
472-580 aa · 109 aa · 18.4% of protein
Raw token
HATPase_c:472:0.000000000289:580:111:109- Raw architecture: His_kinase:377:1.58e-27:455:80:80#HATPase_c:472:0.000000000289:580:111:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000484655::NZ_AXVN01000014.1::G00022
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span38579-41906Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_000484655::NZ_AXVN01000014.1::G00022Context members
K316_RS0106010K316_RS0106015
Partner locus tags
K316_RS0106010K316_RS0106015
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_025578048.1Primary protein accession used for annex mappings.
UniProt accessionA0A174QQQ4Primary UniProt accession resolved in the annex database.
UniProt IDA0A174QQQ4_9FIRMDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagK316_RS0106010Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_AXVN01000014.1Sequence record reported by the local genomic context database.
Genomic interval38 579-40 354 nt1 776 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span38 579-41 906 ntGCF_000484655::NZ_AXVN01000014.1::G00022
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000484655::NZ_AXVN01000014.1::G00022Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_AXVN01000014.1All displayed genes belong to this local TCS context.
Neighborhood span38 579-41 906 nt3 328 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
38 579 nt41 906 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
K316_RS0106010GCF_000484655#K316_RS0106010
HKClassicCurrent focus
38 579-40 354 nt · Forward (+)
K316_RS0106015GCF_000484655#K316_RS0106015
RRunclassified
40 332-41 906 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000484655#K316_RS0106010The current gene is the representative for this cluster.
PFAM architectureHis_kinase + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1105413
Simplified PFAM architecture for HKOC_1105413
PFAM domain coverage: 185 / 591 aa (31.3%)
1 aa591 aa
His_kinaseHATPase_c
- Simplified architecture: His_kinase + HATPase_c
- Raw architecture: His_kinase[377-454] | HATPase_c[473-579]
- Domain count: 2
- Matched identifier: HKOC_1105413
- Positioned domains: His_kinase 377-454 ; HATPase_c 473-579
Cluster members and taxonomy
Representative gene: GCF_000484655#K316_RS0106010
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 121 115 · GCF_000484655
AssemblyASM48465v1 · Scaffoldhaploid
Genome composition4 508 468 bp · 41,5% GCBlautia wexlerae DSM 19850
Signal transduction countsGenes 162 · HK 80 · RR 80CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key