1 HisKA#1
208-271 aa · 64 aa · 15.0% of protein
Raw token
HisKA:208:0.00000000000499:271:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
IAW_RS07185
Histidine kinase, Classic
Bacillus cereus str. Schrouff · GCF_000398945
ClassHKTypeClassicLength426 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000398945#IAW_RS07185Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length426 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage168 / 426 aa (39.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa426 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
313-416 aa · 104 aa · 24.4% of protein
Raw token
HATPase_c:313:2.36e-22:416:107:109- Raw architecture: HisKA:208:0.00000000000499:271:64:64#HATPase_c:313:2.36e-22:416:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000398945::NZ_KB976107.1::G00013
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span1370359-1371639Genomic interval covered by the local TCS group.
Identifiers
Old locus tagIAW_01446RefSeq proteinWP_000513024.1
Context group ID
GCF_000398945::NZ_KB976107.1::G00013Context members
IAW_RS07185
Partner locus tags
IAW_RS07185
Partner old locus tags
IAW_01446
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000513024.1Primary protein accession used for annex mappings.
UniProt accessionA0AAX3HSS1Primary UniProt accession resolved in the annex database.
UniProt IDA0AAX3HSS1_BACTIDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagIAW_RS07185Primary locus identifier stored in the genes table.
Old locus tagIAW_01446Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_KB976107.1Sequence record reported by the local genomic context database.
Genomic interval1 370 359-1 371 639 nt1 281 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span1 370 359-1 371 639 ntGCF_000398945::NZ_KB976107.1::G00013
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000398945::NZ_KB976107.1::G00013Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_KB976107.1All displayed genes belong to this local TCS context.
Neighborhood span1 370 359-1 371 639 nt1 281 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 370 359 nt1 371 639 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
IAW_RS07185GCF_000398945#IAW_RS07185
HKClassicCurrent focus
1 370 359-1 371 639 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000021305#BCG9842_RS17290Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2207967
Simplified PFAM architecture for HKOC_2207967
PFAM domain coverage: 168 / 426 aa (39.4%)
1 aa426 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[208-271] | HATPase_c[313-416]
- Domain count: 2
- Matched identifier: HKOC_2207967
- Positioned domains: HisKA 208-271 ; HATPase_c 313-416
Cluster members and taxonomy
Representative gene: GCF_000021305#BCG9842_RS17290
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 718 221 · GCF_000398945
AssemblyBaci_cere_Schrouff_V2 · Scaffoldhaploid
Genome composition6 267 079 bp · 35,0% GCBacillus cereus str. Schrouff
Signal transduction countsGenes 114 · HK 62 · RR 52CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key