1 HisKA#1
146-209 aa · 64 aa · 17.3% of protein
Raw token
HisKA:146:0.0000000000302:209:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
SCQ_RS14730
Histidine kinase, Classic
Enterococcus faecalis EnGen0116 · GCF_000391685
ClassHKTypeClassicLength370 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000391685#SCQ_RS14730Stable P2CS identifier used across views.
GenomeGCF_000391685Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length370 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage173 / 370 aa (46.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa370 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
259-367 aa · 109 aa · 29.5% of protein
Raw token
HATPase_c:259:1.1e-24:367:110:109- Raw architecture: HisKA:146:0.0000000000302:209:64:64#HATPase_c:259:1.1e-24:367:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000391685::NZ_KB932593.1::G00016
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1454675-1456484Genomic interval covered by the local TCS group.
Identifiers
Old locus tagSCQ_02313RefSeq proteinWP_002370559.1
Context group ID
GCF_000391685::NZ_KB932593.1::G00016Context members
SCQ_RS14730SCQ_RS14735
Partner locus tags
SCQ_RS14730SCQ_RS14735
Partner old locus tags
SCQ_02313SCQ_02314
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_002370559.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagSCQ_RS14730Primary locus identifier stored in the genes table.
Old locus tagSCQ_02313Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_KB932593.1Sequence record reported by the local genomic context database.
Genomic interval1 454 675-1 455 787 nt1 113 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span1 454 675-1 456 484 ntGCF_000391685::NZ_KB932593.1::G00016
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000391685::NZ_KB932593.1::G00016Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_KB932593.1All displayed genes belong to this local TCS context.
Neighborhood span1 454 675-1 456 484 nt1 810 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 454 675 nt1 456 484 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
SCQ_RS14730GCF_000391685#SCQ_RS14730
HKClassicCurrent focus
1 454 675-1 455 787 nt · Reverse (-)
SCQ_RS14735GCF_000391685#SCQ_RS14735
RROmpR
1 455 780-1 456 484 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000148045#HMPREF9514_RS07675Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2682654
Simplified PFAM architecture for HKOC_2682654
PFAM domain coverage: 173 / 370 aa (46.8%)
1 aa370 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[147-210] | HATPase_c[259-367]
- Domain count: 2
- Matched identifier: HKOC_2682654
- Positioned domains: HisKA 147-210 ; HATPase_c 259-367
Cluster members and taxonomy
Representative gene: GCF_000148045#HMPREF9514_RS07675
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 157 375 · GCF_000391685
AssemblyEnte_faec_UAA906_V1 · Scaffoldhaploid
Genome composition2 872 691 bp · 37,5% GCEnterococcus faecalis EnGen0116
Signal transduction countsGenes 35 · HK 16 · RR 19CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyEnterococcaceaeGenusEnterococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Enterococcaceae7Enterococcus
Related genes
Preview from the same derived genome key