1 HisKA#1
162-229 aa · 68 aa · 17.3% of protein
Raw token
HisKA:162:0.0000000000000511:229:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QAM_RS18590
Histidine kinase, Classic
Enterococcus faecalis EnGen0070 · GCF_000391005
ClassHKTypeClassicLength393 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000391005#QAM_RS18590Stable P2CS identifier used across views.
GenomeGCF_000391005Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length393 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage180 / 393 aa (45.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa393 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
275-386 aa · 112 aa · 28.5% of protein
Raw token
HATPase_c:275:8.95e-30:386:113:109- Raw architecture: HisKA:162:0.0000000000000511:229:68:64#HATPase_c:275:8.95e-30:386:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000391005::NZ_KB932424.1::G00016
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span5291-7151Genomic interval covered by the local TCS group.
Identifiers
Old locus tagQAM_02889RefSeq proteinWP_010714152.1
Context group ID
GCF_000391005::NZ_KB932424.1::G00016Context members
QAM_RS18585QAM_RS18590
Partner locus tags
QAM_RS18585QAM_RS18590
Partner old locus tags
QAM_02888QAM_02889
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_010714152.1Primary protein accession used for annex mappings.
UniProt accessionA0A855U7T7Primary UniProt accession resolved in the annex database.
UniProt IDA0A855U7T7_ENTFLDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQAM_RS18590Primary locus identifier stored in the genes table.
Old locus tagQAM_02889Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_KB932424.1Sequence record reported by the local genomic context database.
Genomic interval5 970-7 151 nt1 182 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span5 291-7 151 ntGCF_000391005::NZ_KB932424.1::G00016
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000391005::NZ_KB932424.1::G00016Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_KB932424.1All displayed genes belong to this local TCS context.
Neighborhood span5 291-7 151 nt1 861 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
5 291 nt7 151 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
QAM_RS18585GCF_000391005#QAM_RS18585
RROmpR
5 291-5 980 nt · Forward (+)
QAM_RS18590GCF_000391005#QAM_RS18590
HKClassicCurrent focus
5 970-7 151 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000390945#QAG_RS17200Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2503511
Simplified PFAM architecture for HKOC_2503511
PFAM domain coverage: 177 / 393 aa (45.0%)
1 aa393 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[163-228] | HATPase_c[275-385]
- Domain count: 2
- Matched identifier: HKOC_2503511
- Positioned domains: HisKA 163-228 ; HATPase_c 275-385
Cluster members and taxonomy
Representative gene: GCF_000390945#QAG_RS17200
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 151 212 · GCF_000391005
AssemblyEnte_faec_B1385_V1 · Scaffoldhaploid
Genome composition3 273 104 bp · 37,0% GCEnterococcus faecalis EnGen0070
Signal transduction countsGenes 31 · HK 14 · RR 17CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyEnterococcaceaeGenusEnterococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Enterococcaceae7Enterococcus
Related genes
Preview from the same derived genome key