1 HisKA#1
162-228 aa · 67 aa · 17.0% of protein
Raw token
HisKA:162:0.0000000000000696:228:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
Q97_RS19030
Histidine kinase, Classic
Enterococcus faecalis EnGen0061 · GCF_000390545
ClassHKTypeClassicLength393 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000390545#Q97_RS19030Stable P2CS identifier used across views.
GenomeGCF_000390545Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length393 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage179 / 393 aa (45.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa393 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
275-386 aa · 112 aa · 28.5% of protein
Raw token
HATPase_c:275:1.14e-29:386:113:109- Raw architecture: HisKA:162:0.0000000000000696:228:67:64#HATPase_c:275:1.14e-29:386:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000390545::NZ_KB932323.1::G00014
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span5683-7543Genomic interval covered by the local TCS group.
Identifiers
Old locus tagQ97_02954RefSeq proteinWP_010708447.1
Context group ID
GCF_000390545::NZ_KB932323.1::G00014Context members
Q97_RS19025Q97_RS19030
Partner locus tags
Q97_RS19025Q97_RS19030
Partner old locus tags
Q97_02953Q97_02954
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_010708447.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQ97_RS19030Primary locus identifier stored in the genes table.
Old locus tagQ97_02954Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_KB932323.1Sequence record reported by the local genomic context database.
Genomic interval6 362-7 543 nt1 182 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span5 683-7 543 ntGCF_000390545::NZ_KB932323.1::G00014
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000390545::NZ_KB932323.1::G00014Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_KB932323.1All displayed genes belong to this local TCS context.
Neighborhood span5 683-7 543 nt1 861 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
5 683 nt7 543 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
Q97_RS19025GCF_000390545#Q97_RS19025
RROmpR
5 683-6 372 nt · Forward (+)
Q97_RS19030GCF_000390545#Q97_RS19030
HKClassicCurrent focus
6 362-7 543 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000390545#Q97_RS19030The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2503510
Simplified PFAM architecture for HKOC_2503510
PFAM domain coverage: 176 / 393 aa (44.8%)
1 aa393 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[163-227] | HATPase_c[275-385]
- Domain count: 2
- Matched identifier: HKOC_2503510
- Positioned domains: HisKA 163-227 ; HATPase_c 275-385
Cluster members and taxonomy
Representative gene: GCF_000390545#Q97_RS19030
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 151 188 · GCF_000390545
AssemblyEnte_faec_B56765_V1 · Scaffoldhaploid
Genome composition3 348 334 bp · 37,0% GCEnterococcus faecalis EnGen0061
Signal transduction countsGenes 28 · HK 12 · RR 15CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyEnterococcaceaeGenusEnterococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Enterococcaceae7Enterococcus
Related genes
Preview from the same derived genome key