1 HisKA#1
210-274 aa · 65 aa · 11.5% of protein
Raw token
HisKA:210:0.00000925:274:66:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
WI7_RS00695
Histidine kinase, Hybrid
Escherichia coli KTE105 · GCF_000326145
ClassHKTypeHybridLength567 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000326145#WI7_RS00695Stable P2CS identifier used across views.
GenomeGCF_000326145Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length567 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage283 / 567 aa (49.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa567 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
319-428 aa · 110 aa · 19.4% of protein
Raw token
HATPase_c:319:1.07e-30:428:110:1093 Response_reg#3
454-561 aa · 108 aa · 19.0% of protein
Raw token
Response_reg:454:1.77e-19:561:114:111- Raw architecture: HisKA:210:0.00000925:274:66:64#HATPase_c:319:1.07e-30:428:110:109#Response_reg:454:1.77e-19:561:114:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000326145::NZ_ANXM01000080.1::G00038
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span483-2186Genomic interval covered by the local TCS group.
Identifiers
Old locus tagWI7_04565RefSeq proteinWP_001773449.1
Context group ID
GCF_000326145::NZ_ANXM01000080.1::G00038Context members
WI7_RS00695
Partner locus tags
WI7_RS00695
Partner old locus tags
WI7_04565
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_001773449.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagWI7_RS00695Primary locus identifier stored in the genes table.
Old locus tagWI7_04565Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_ANXM01000080.1Sequence record reported by the local genomic context database.
Genomic interval483-2 186 nt1 704 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span483-2 186 ntGCF_000326145::NZ_ANXM01000080.1::G00038
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000326145::NZ_ANXM01000080.1::G00038Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_ANXM01000080.1All displayed genes belong to this local TCS context.
Neighborhood span483-2 186 nt1 704 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
483 nt2 186 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
WI7_RS00695GCF_000326145#WI7_RS00695
HKHybridCurrent focus
483-2 186 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000326145#WI7_RS00695The current gene is the representative for this cluster.
PFAM architectureHATPase_c + Response_reg2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1224946
Simplified PFAM architecture for HKOC_1224946
PFAM domain coverage: 198 / 567 aa (34.9%)
1 aa567 aa
HATPase_cResponse_reg
- Simplified architecture: HATPase_c + Response_reg
- Raw architecture: HATPase_c[319-428] | Response_reg[454-541]
- Domain count: 2
- Matched identifier: HKOC_1224946
- Positioned domains: HATPase_c 319-428 ; Response_reg 454-541
Cluster members and taxonomy
Representative gene: GCF_000326145#WI7_RS00695
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 169 373 · GCF_000326145
AssemblyEsch_coli_KTE105_V1 · Contighaploid
Genome composition4 967 959 bp · 50,5% GCEscherichia coli KTE105
Signal transduction countsGenes 63 · HK 30 · RR 33CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomPseudomonadatiPhylumPseudomonadotaClassGammaproteobacteriaOrderEnterobacteralesFamilyEnterobacteriaceaeGenusEscherichia
Lineage path7 lineage nodes
1Bacteria2Pseudomonadati3Pseudomonadota4Gammaproteobacteria5Enterobacterales6Enterobacteriaceae7Escherichia
Related genes
Preview from the same derived genome key