1 HisKA#1
83-142 aa · 60 aa · 20.1% of protein
Raw token
HisKA:83:0.00000000000000895:142:60:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
IG3_RS06605
Histidine kinase, Classic
Bacillus cereus HuA2-1 · GCF_000293705
ClassHKTypeClassicLength299 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000293705#IG3_RS06605Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length299 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage153 / 299 aa (51.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa299 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
197-289 aa · 93 aa · 31.1% of protein
Raw token
HATPase_c:197:7.8e-18:289:94:109- Raw architecture: HisKA:83:0.00000000000000895:142:60:64#HATPase_c:197:7.8e-18:289:94:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000293705::NZ_JH804672.1::G00023
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span1354111-1355010Genomic interval covered by the local TCS group.
Identifiers
Old locus tagIG3_01311RefSeq proteinWP_002135696.1
Context group ID
GCF_000293705::NZ_JH804672.1::G00023Context members
IG3_RS06605
Partner locus tags
IG3_RS06605
Partner old locus tags
IG3_01311
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002135696.1Primary protein accession used for annex mappings.
UniProt accessionJ9C9Y0Primary UniProt accession resolved in the annex database.
UniProt IDJ9C9Y0_BACCEDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagIG3_RS06605Primary locus identifier stored in the genes table.
Old locus tagIG3_01311Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JH804672.1Sequence record reported by the local genomic context database.
Genomic interval1 354 111-1 355 010 nt900 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 354 111-1 355 010 ntGCF_000293705::NZ_JH804672.1::G00023
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000293705::NZ_JH804672.1::G00023Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JH804672.1All displayed genes belong to this local TCS context.
Neighborhood span1 354 111-1 355 010 nt900 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 354 111 nt1 355 010 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
IG3_RS06605GCF_000293705#IG3_RS06605
HKClassicCurrent focus
1 354 111-1 355 010 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000293705#IG3_RS06605The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2887620
Simplified PFAM architecture for HKOC_2887620
PFAM domain coverage: 151 / 299 aa (50.5%)
1 aa299 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[83-142] | HATPase_c[197-287]
- Domain count: 2
- Matched identifier: HKOC_2887620
- Positioned domains: HisKA 83-142 ; HATPase_c 197-287
Cluster members and taxonomy
Representative gene: GCF_000293705#IG3_RS06605
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 053 201 · GCF_000293705
AssemblyBaci_cere_HuA2-1_V1 · Scaffoldhaploid
Genome composition6 465 275 bp · 35,0% GCBacillus cereus HuA2-1
Signal transduction countsGenes 130 · HK 71 · RR 59CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key