1 HisKA#1
234-298 aa · 65 aa · 14.3% of protein
Raw token
HisKA:234:0.00000000000343:298:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ICY_RS07590
Histidine kinase, Classic
Bacillus cereus BAG2X1-3 · GCF_000291515
ClassHKTypeClassicLength453 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000291515#ICY_RS07590Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length453 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage174 / 453 aa (38.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa453 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
343-451 aa · 109 aa · 24.1% of protein
Raw token
HATPase_c:343:1.86e-20:451:109:109- Raw architecture: HisKA:234:0.00000000000343:298:65:64#HATPase_c:343:1.86e-20:451:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000291515::NZ_JH791914.1::G00016
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1435840-1437851Genomic interval covered by the local TCS group.
Identifiers
Old locus tagICY_01497RefSeq proteinWP_000416682.1
Context group ID
GCF_000291515::NZ_JH791914.1::G00016Context members
ICY_RS07585ICY_RS07590
Partner locus tags
ICY_RS07585ICY_RS07590
Partner old locus tags
ICY_01496ICY_01497
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_000416682.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagICY_RS07590Primary locus identifier stored in the genes table.
Old locus tagICY_01497Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JH791914.1Sequence record reported by the local genomic context database.
Genomic interval1 436 490-1 437 851 nt1 362 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 435 840-1 437 851 ntGCF_000291515::NZ_JH791914.1::G00016
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000291515::NZ_JH791914.1::G00016Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JH791914.1All displayed genes belong to this local TCS context.
Neighborhood span1 435 840-1 437 851 nt2 012 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 435 840 nt1 437 851 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ICY_RS07585GCF_000291515#ICY_RS07585
RROmpR
1 435 840-1 436 502 nt · Forward (+)
ICY_RS07590GCF_000291515#ICY_RS07590
HKClassicCurrent focus
1 436 490-1 437 851 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000291515#ICY_RS07590The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1925317
Simplified PFAM architecture for HKOC_1925317
PFAM domain coverage: 172 / 453 aa (38.0%)
1 aa453 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[234-297] | HATPase_c[344-451]
- Domain count: 2
- Matched identifier: HKOC_1925317
- Positioned domains: HisKA 234-297 ; HATPase_c 344-451
Cluster members and taxonomy
Representative gene: GCF_000291515#ICY_RS07590
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 053 181 · GCF_000291515
AssemblyBaci_cere_BAG2X1-3_G13211_V1 · Scaffoldhaploid
Genome composition5 250 571 bp · 35,5% GCBacillus cereus BAG2X1-3
Signal transduction countsGenes 98 · HK 53 · RR 45CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key