1 HisKA_3#1
569-632 aa · 64 aa · 8.4% of protein
Raw token
HisKA_3:569:0.000000353:632:66:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
IIA_RS03780
Histidine kinase, Classic
Bacillus cereus VD014 · GCF_000291255
ClassHKTypeClassicLength766 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000291255#IIA_RS03780Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length766 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 766 aa (20.2%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa766 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
674-764 aa · 91 aa · 11.9% of protein
Raw token
HATPase_c:674:0.000000000000001:764:104:109- Raw architecture: HisKA_3:569:0.000000353:632:66:68#HATPase_c:674:0.000000000000001:764:104:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000291255::NZ_JH792025.1::G00009
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span761406-764426Genomic interval covered by the local TCS group.
Identifiers
Old locus tagIIA_00695RefSeq proteinWP_002163859.1
Context group ID
GCF_000291255::NZ_JH792025.1::G00009Context members
IIA_RS03780IIA_RS03785
Partner locus tags
IIA_RS03780IIA_RS03785
Partner old locus tags
IIA_00695IIA_00696
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002163859.1Primary protein accession used for annex mappings.
UniProt accessionA0A9W5KCE6Primary UniProt accession resolved in the annex database.
UniProt IDA0A9W5KCE6_BACC8Display identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagIIA_RS03780Primary locus identifier stored in the genes table.
Old locus tagIIA_00695Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JH792025.1Sequence record reported by the local genomic context database.
Genomic interval761 406-763 706 nt2 301 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span761 406-764 426 ntGCF_000291255::NZ_JH792025.1::G00009
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000291255::NZ_JH792025.1::G00009Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JH792025.1All displayed genes belong to this local TCS context.
Neighborhood span761 406-764 426 nt3 021 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
761 406 nt764 426 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
IIA_RS03780GCF_000291255#IIA_RS03780
HKClassicCurrent focus
761 406-763 706 nt · Forward (+)
IIA_RS03785GCF_000291255#IIA_RS03785
RRNarL
763 770-764 426 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000291255#IIA_RS03780The current gene is the representative for this cluster.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0629372
Simplified PFAM architecture for HKOC_0629372
PFAM domain coverage: 155 / 766 aa (20.2%)
1 aa766 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[569-632] | HATPase_c[674-764]
- Domain count: 2
- Matched identifier: HKOC_0629372
- Positioned domains: HisKA_3 569-632 ; HATPase_c 674-764
Cluster members and taxonomy
Representative gene: GCF_000291255#IIA_RS03780
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 053 223 · GCF_000291255
AssemblyBaci_cere_VD014_V1 · Scaffoldhaploid
Genome composition6 204 183 bp · 34,5% GCBacillus cereus VD014
Signal transduction countsGenes 121 · HK 64 · RR 57CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key