1 HisKA#1
85-152 aa · 68 aa · 21.9% of protein
Raw token
HisKA:85:0.00000000000000705:152:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
II5_RS01885
Histidine kinase, Classic
Bacillus cereus MSX-A1 · GCF_000291195
ClassHKTypeClassicLength311 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000291195#II5_RS01885Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length311 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 311 aa (57.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa311 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
198-307 aa · 110 aa · 35.4% of protein
Raw token
HATPase_c:198:1.84e-26:307:110:109- Raw architecture: HisKA:85:0.00000000000000705:152:68:64#HATPase_c:198:1.84e-26:307:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000291195::NZ_JH792104.1::G00008
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span341667-342602Genomic interval covered by the local TCS group.
Identifiers
Old locus tagII5_00360RefSeq proteinWP_000247670.1
Context group ID
GCF_000291195::NZ_JH792104.1::G00008Context members
II5_RS01885
Partner locus tags
II5_RS01885
Partner old locus tags
II5_00360
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000247670.1Primary protein accession used for annex mappings.
UniProt accessionA0ABC9SWA5Primary UniProt accession resolved in the annex database.
UniProt IDA0ABC9SWA5_BACCEDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagII5_RS01885Primary locus identifier stored in the genes table.
Old locus tagII5_00360Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JH792104.1Sequence record reported by the local genomic context database.
Genomic interval341 667-342 602 nt936 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span341 667-342 602 ntGCF_000291195::NZ_JH792104.1::G00008
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000291195::NZ_JH792104.1::G00008Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JH792104.1All displayed genes belong to this local TCS context.
Neighborhood span341 667-342 602 nt936 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
341 667 nt342 602 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
II5_RS01885GCF_000291195#II5_RS01885
HKClassicCurrent focus
341 667-342 602 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000290955#IC1_RS01810Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2876455
Simplified PFAM architecture for HKOC_2876455
PFAM domain coverage: 174 / 311 aa (55.9%)
1 aa311 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[86-152] | HATPase_c[201-307]
- Domain count: 2
- Matched identifier: HKOC_2876455
- Positioned domains: HisKA 86-152 ; HATPase_c 201-307
Cluster members and taxonomy
Representative gene: GCF_000290955#IC1_RS01810
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 053 220 · GCF_000291195
AssemblyBaci_cere_MSX-A1_V1 · Scaffoldhaploid
Genome composition6 066 700 bp · 35,0% GCBacillus cereus MSX-A1
Signal transduction countsGenes 103 · HK 55 · RR 48CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key