1 HisKA#1
162-229 aa · 68 aa · 17.3% of protein
Raw token
HisKA:162:0.0000000000000522:229:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
EFD32_RS14740
Histidine kinase, Classic
Enterococcus faecalis D32 · GCF_000281195
ClassHKTypeClassicLength393 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000281195#EFD32_RS14740Stable P2CS identifier used across views.
GenomeGCF_000281195Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length393 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage180 / 393 aa (45.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa393 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
275-386 aa · 112 aa · 28.5% of protein
Raw token
HATPase_c:275:9.72e-30:386:113:109- Raw architecture: HisKA:162:0.0000000000000522:229:68:64#HATPase_c:275:9.72e-30:386:113:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000281195::NC_018221.1::G00017
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span2933595-2935455Genomic interval covered by the local TCS group.
Identifiers
Old locus tagEFD32_2842RefSeq proteinWP_002363566.1
Context group ID
GCF_000281195::NC_018221.1::G00017Context members
EFD32_RS14735EFD32_RS14740
Partner locus tags
EFD32_RS14735EFD32_RS14740
Partner old locus tags
EFD32_2841EFD32_2842
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002363566.1Primary protein accession used for annex mappings.
UniProt accessionA0ABC9TKF3Primary UniProt accession resolved in the annex database.
UniProt IDA0ABC9TKF3_ENTFLDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagEFD32_RS14740Primary locus identifier stored in the genes table.
Old locus tagEFD32_2842Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_018221.1Sequence record reported by the local genomic context database.
Genomic interval2 934 274-2 935 455 nt1 182 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span2 933 595-2 935 455 ntGCF_000281195::NC_018221.1::G00017
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000281195::NC_018221.1::G00017Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_018221.1All displayed genes belong to this local TCS context.
Neighborhood span2 933 595-2 935 455 nt1 861 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
2 933 595 nt2 935 455 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
EFD32_RS14735GCF_000281195#EFD32_RS14735
RROmpR
2 933 595-2 934 284 nt · Forward (+)
EFD32_RS14740GCF_000281195#EFD32_RS14740
HKClassicCurrent focus
2 934 274-2 935 455 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000007785#EF_RS15585Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2503241
Simplified PFAM architecture for HKOC_2503241
PFAM domain coverage: 177 / 393 aa (45.0%)
1 aa393 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[163-228] | HATPase_c[275-385]
- Domain count: 2
- Matched identifier: HKOC_2503241
- Positioned domains: HisKA 163-228 ; HATPase_c 275-385
Cluster members and taxonomy
Representative gene: GCF_000007785#EF_RS15585
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 206 105 · GCF_000281195
AssemblyASM28119v1 · Complete Genomehaploid
Genome composition3 062 505 bp · 37,5% GCEnterococcus faecalis D32
Signal transduction countsGenes 31 · HK 14 · RR 17CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderLactobacillalesFamilyEnterococcaceaeGenusEnterococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Lactobacillales6Enterococcaceae7Enterococcus
Related genes
Preview from the same derived genome key