1 HisKA#1
192-247 aa · 56 aa · 13.4% of protein
Raw token
HisKA:192:0.00000000689:247:57:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BAK_RS05730
Histidine kinase, Classic
Bacillus anthracis str. A0389 · GCF_000219895
ClassHKTypeClassicLength417 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000219895#BAK_RS05730Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length417 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage164 / 417 aa (39.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa417 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
295-402 aa · 108 aa · 25.9% of protein
Raw token
HATPase_c:295:1.27e-17:402:111:109- Raw architecture: HisKA:192:0.00000000689:247:57:64#HATPase_c:295:1.27e-17:402:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000219895::NZ_ABLB01000003.1::G00045
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span89479-90732Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBAK_5106RefSeq proteinWP_003163881.1
Context group ID
GCF_000219895::NZ_ABLB01000003.1::G00045Context members
BAK_RS05730
Partner locus tags
BAK_RS05730
Partner old locus tags
BAK_5106
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_003163881.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBAK_RS05730Primary locus identifier stored in the genes table.
Old locus tagBAK_5106Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_ABLB01000003.1Sequence record reported by the local genomic context database.
Genomic interval89 479-90 732 nt1 254 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span89 479-90 732 ntGCF_000219895::NZ_ABLB01000003.1::G00045
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000219895::NZ_ABLB01000003.1::G00045Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_ABLB01000003.1All displayed genes belong to this local TCS context.
Neighborhood span89 479-90 732 nt1 254 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
89 479 nt90 732 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
BAK_RS05730GCF_000219895#BAK_RS05730
HKClassicCurrent focus
89 479-90 732 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000219895#BAK_RS05730The current gene is the representative for this cluster.
PFAM architectureMASE12 + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2293532
Simplified PFAM architecture for HKOC_2293532
PFAM domain coverage: 319 / 417 aa (76.5%)
1 aa417 aa
MASE12HisKAHATPase_c
- Simplified architecture: MASE12 + HisKA + HATPase_c
- Raw architecture: MASE12[10-165] | HisKA[192-247] | HATPase_c[295-401]
- Domain count: 3
- Matched identifier: HKOC_2293532
- Positioned domains: MASE12 10-165 ; HisKA 192-247 ; HATPase_c 295-401
Cluster members and taxonomy
Representative gene: GCF_000219895#BAK_RS05730
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 486 623 · GCF_000219895
AssemblyASM21989v1 · Contighaploid
Genome composition5 420 403 bp · 35,0% GCBacillus anthracis str. A0389
Signal transduction countsGenes 93 · HK 46 · RR 46CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key