1 Response_reg#1
4-116 aa · 113 aa · 56.5% of protein
Raw token
Response_reg:4:7.74e-26:116:113:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BAWN_RS10130
Response regulator NarL family
Bacillus anthracis str. Western North America USA6153 · GCF_000167315
ClassRRTypeNarLLength200 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000167315#BAWN_RS10130Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
Response_regHTH_LUXR
Protein length200 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage169 / 200 aa (84.5%)Merged over positioned domains only.
Domain description1 Response_reg,1 HTH_LUXRSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa200 aa
Domain-by-domain annotation2 items
2 HTH_LUXR#2
139-194 aa · 56 aa · 28.0% of protein
Raw token
HTH_LUXR:139:9.75e-21:194:56:58- Raw architecture: Response_reg:4:7.74e-26:116:113:111#HTH_LUXR:139:9.75e-21:194:56:58
- Domain description: 1 Response_reg,1 HTH_LUXR
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000167315::NZ_AAER01000032.1::G00037
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span24820-26549Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_000167315::NZ_AAER01000032.1::G00037Context members
BAWN_RS10125BAWN_RS10130
Partner locus tags
BAWN_RS10125BAWN_RS10130
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_000619258.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBAWN_RS10130Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_AAER01000032.1Sequence record reported by the local genomic context database.
Genomic interval25 947-26 549 nt603 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span24 820-26 549 ntGCF_000167315::NZ_AAER01000032.1::G00037
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000167315::NZ_AAER01000032.1::G00037Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_AAER01000032.1All displayed genes belong to this local TCS context.
Neighborhood span24 820-26 549 nt1 730 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
24 820 nt26 549 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BAWN_RS10125GCF_000167315#BAWN_RS10125
HKClassic
24 820-25 950 nt · Forward (+)
BAWN_RS10130GCF_000167315#BAWN_RS10130
RRNarLCurrent focus
25 947-26 549 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000167315#BAWN_RS10130The current gene is the representative for this cluster.
PFAM architectureResponse_reg + GerE2 domains in the representative PFAM annotation.
PFAM architecture for RROC_2134562
Simplified PFAM architecture for RROC_2134562
PFAM domain coverage: 168 / 200 aa (84.0%)
1 aa200 aa
Response_regGerE
- Simplified architecture: Response_reg + GerE
- Raw architecture: Response_reg[4-115] | GerE[139-194]
- Domain count: 2
- Matched identifier: RROC_2134562
- Positioned domains: Response_reg 4-115 ; Response_reg 4-115 ; GerE 139-194 ; GerE 139-194
Cluster members and taxonomy
Representative gene: GCF_000167315#BAWN_RS10130
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 212 045 · GCF_000167315
AssemblyASM16731v1 · Scaffoldhaploid
Genome composition5 511 345 bp · 35,0% GCBacillus anthracis str. Western North America USA6153
Signal transduction countsGenes 96 · HK 46 · RR 49CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key