1 HisKA_3#1
568-631 aa · 64 aa · 8.5% of protein
Raw token
HisKA_3:568:0.00000904:631:73:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BTHUR0005_RS04030
Histidine kinase, Classic
Bacillus thuringiensis serovar pakistani str. T13001 · GCF_000161555
ClassHKTypeClassicLength757 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000161555#BTHUR0005_RS04030Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length757 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage149 / 757 aa (19.7%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa757 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
673-757 aa · 85 aa · 11.2% of protein
Raw token
HATPase_c:673:0.00000000000049:757:96:109- Raw architecture: HisKA_3:568:0.00000904:631:73:68#HATPase_c:673:0.00000000000049:757:96:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000161555::NZ_CM000750.1::G00008
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span739663-741933Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_000161555::NZ_CM000750.1::G00008Context members
BTHUR0005_RS04030
Partner locus tags
BTHUR0005_RS04030
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_000621688.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBTHUR0005_RS04030Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_CM000750.1Sequence record reported by the local genomic context database.
Genomic interval739 663-741 933 nt2 271 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span739 663-741 933 ntGCF_000161555::NZ_CM000750.1::G00008
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000161555::NZ_CM000750.1::G00008Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CM000750.1All displayed genes belong to this local TCS context.
Neighborhood span739 663-741 933 nt2 271 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
739 663 nt741 933 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
BTHUR0005_RS04030GCF_000161555#BTHUR0005_RS04030
HKClassicCurrent focus
739 663-741 933 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000290795#IK5_RS15425Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_0621336
Simplified PFAM architecture for HKOC_0621336
PFAM domain coverage: 85 / 769 aa (11.1%)
1 aa769 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[673-757]
- Domain count: 1
- Matched identifier: HKOC_0621336
- Positioned domains: HATPase_c 673-757
Cluster members and taxonomy
Representative gene: GCF_000290795#IK5_RS15425
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 527 027 · GCF_000161555
AssemblyASM16155v1 · Chromosomehaploid
Genome composition6 037 513 bp · 35,0% GCBacillus thuringiensis serovar pakistani str. T13001
Signal transduction countsGenes 109 · HK 58 · RR 51CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key