1 HisKA#1
108-175 aa · 68 aa · 20.2% of protein
Raw token
HisKA:108:0.0000000000000454:175:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BCERE0027_RS01390
Histidine kinase, Classic
Bacillus cereus AH676 · GCF_000161355
ClassHKTypeClassicLength337 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000161355#BCERE0027_RS01390Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length337 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 337 aa (52.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa337 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
221-330 aa · 110 aa · 32.6% of protein
Raw token
HATPase_c:221:2.65e-28:330:110:109- Raw architecture: HisKA:108:0.0000000000000454:175:68:64#HATPase_c:221:2.65e-28:330:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000161355::NZ_CM000738.1::G00002
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span235606-237322Genomic interval covered by the local TCS group.
Identifiers
Old locus tagbcere0027_2450RefSeq proteinWP_000845330.1
Context group ID
GCF_000161355::NZ_CM000738.1::G00002Context members
BCERE0027_RS01385BCERE0027_RS01390
Partner locus tags
BCERE0027_RS01385BCERE0027_RS01390
Partner old locus tags
bcere0027_2460bcere0027_2450
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000845330.1Primary protein accession used for annex mappings.
UniProt accessionA0ABD7R898Primary UniProt accession resolved in the annex database.
UniProt IDA0ABD7R898_BACCEDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBCERE0027_RS01390Primary locus identifier stored in the genes table.
Old locus tagbcere0027_2450Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CM000738.1Sequence record reported by the local genomic context database.
Genomic interval236 309-237 322 nt1 014 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span235 606-237 322 ntGCF_000161355::NZ_CM000738.1::G00002
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000161355::NZ_CM000738.1::G00002Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CM000738.1All displayed genes belong to this local TCS context.
Neighborhood span235 606-237 322 nt1 717 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
235 606 nt237 322 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BCERE0027_RS01385GCF_000161355#BCERE0027_RS01385
RROmpR
235 606-236 319 nt · Forward (+)
BCERE0027_RS01390GCF_000161355#BCERE0027_RS01390
HKClassicCurrent focus
236 309-237 322 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000161355#BCERE0027_RS01390The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2844323
Simplified PFAM architecture for HKOC_2844323
PFAM domain coverage: 176 / 337 aa (52.2%)
1 aa337 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[109-174] | HATPase_c[222-331]
- Domain count: 2
- Matched identifier: HKOC_2844323
- Positioned domains: HisKA 109-174 ; HATPase_c 222-331
Cluster members and taxonomy
Representative gene: GCF_000161355#BCERE0027_RS01390
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 526 991 · GCF_000161355
AssemblyASM16135v1 · Chromosomehaploid
Genome composition5 594 747 bp · 35,0% GCBacillus cereus AH676
Signal transduction countsGenes 106 · HK 58 · RR 48CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key