1 HisKA_3#1
568-631 aa · 64 aa · 8.3% of protein
Raw token
HisKA_3:568:0.00000276:631:73:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BCERE0012_RS03845
Histidine kinase, Classic
Bacillus cereus BDRD-ST24 · GCF_000161055
ClassHKTypeClassicLength767 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000161055#BCERE0012_RS03845Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length767 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage159 / 767 aa (20.7%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa767 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
673-767 aa · 95 aa · 12.4% of protein
Raw token
HATPase_c:673:0.0000000000000162:767:106:109- Raw architecture: HisKA_3:568:0.00000276:631:73:68#HATPase_c:673:0.0000000000000162:767:106:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000161055::NZ_CM000723.1::G00010
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span734083-737078Genomic interval covered by the local TCS group.
Identifiers
Old locus tagbcere0012_7520RefSeq proteinWP_000621687.1
Context group ID
GCF_000161055::NZ_CM000723.1::G00010Context members
BCERE0012_RS03840BCERE0012_RS03845
Partner locus tags
BCERE0012_RS03840BCERE0012_RS03845
Partner old locus tags
bcere0012_7530bcere0012_7520
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_000621687.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBCERE0012_RS03845Primary locus identifier stored in the genes table.
Old locus tagbcere0012_7520Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CM000723.1Sequence record reported by the local genomic context database.
Genomic interval734 775-737 078 nt2 304 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span734 083-737 078 ntGCF_000161055::NZ_CM000723.1::G00010
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000161055::NZ_CM000723.1::G00010Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CM000723.1All displayed genes belong to this local TCS context.
Neighborhood span734 083-737 078 nt2 996 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
734 083 nt737 078 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BCERE0012_RS03840GCF_000161055#BCERE0012_RS03840
RRNarL
734 083-734 739 nt · Reverse (-)
BCERE0012_RS03845GCF_000161055#BCERE0012_RS03845
HKClassicCurrent focus
734 775-737 078 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000161055#BCERE0012_RS03845The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_0627062
Simplified PFAM architecture for HKOC_0627062
PFAM domain coverage: 93 / 767 aa (12.1%)
1 aa767 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[673-765]
- Domain count: 1
- Matched identifier: HKOC_0627062
- Positioned domains: HATPase_c 673-765
Cluster members and taxonomy
Representative gene: GCF_000161055#BCERE0012_RS03845
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 526 974 · GCF_000161055
AssemblyASM16105v1 · Chromosomehaploid
Genome composition5 436 173 bp · 35,0% GCBacillus cereus BDRD-ST24
Signal transduction countsGenes 105 · HK 57 · RR 48CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key