1 HisKA_3#1
568-631 aa · 64 aa · 8.3% of protein
Raw token
HisKA_3:568:0.00000284:631:73:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BMB171_RS04450
Histidine kinase, Classic
Bacillus thuringiensis BMB171 · GCF_000092165
ClassHKTypeClassicLength767 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000092165#BMB171_RS04450Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length767 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage159 / 767 aa (20.7%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa767 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
673-767 aa · 95 aa · 12.4% of protein
Raw token
HATPase_c:673:0.0000000000000272:767:106:109- Raw architecture: HisKA_3:568:0.00000284:631:73:68#HATPase_c:673:0.0000000000000272:767:106:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000092165::NC_014171.1::G00009
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span864450-867445Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBMB171_C0759RefSeq proteinWP_000621686.1
Context group ID
GCF_000092165::NC_014171.1::G00009Context members
BMB171_RS04450BMB171_RS04455
Partner locus tags
BMB171_RS04450BMB171_RS04455
Partner old locus tags
BMB171_C0759BMB171_C0760
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000621686.1Primary protein accession used for annex mappings.
UniProt accessionA0A9X6ITZ1Primary UniProt accession resolved in the annex database.
UniProt IDA0A9X6ITZ1_BACUDDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBMB171_RS04450Primary locus identifier stored in the genes table.
Old locus tagBMB171_C0759Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_014171.1Sequence record reported by the local genomic context database.
Genomic interval864 450-866 753 nt2 304 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span864 450-867 445 ntGCF_000092165::NC_014171.1::G00009
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000092165::NC_014171.1::G00009Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_014171.1All displayed genes belong to this local TCS context.
Neighborhood span864 450-867 445 nt2 996 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
864 450 nt867 445 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BMB171_RS04450GCF_000092165#BMB171_RS04450
HKClassicCurrent focus
864 450-866 753 nt · Forward (+)
BMB171_RS04455GCF_000092165#BMB171_RS04455
RRNarL
866 789-867 445 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000007825#BC_RS04415Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_0627044
Simplified PFAM architecture for HKOC_0627044
PFAM domain coverage: 93 / 767 aa (12.1%)
1 aa767 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[673-765]
- Domain count: 1
- Matched identifier: HKOC_0627044
- Positioned domains: HATPase_c 673-765
Cluster members and taxonomy
Representative gene: GCF_000007825#BC_RS04415
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 714 359 · GCF_000092165
AssemblyASM9216v1 · Complete Genomehaploid
Genome composition5 643 051 bp · 35,0% GCBacillus thuringiensis BMB171
Signal transduction countsGenes 101 · HK 54 · RR 47CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key