1 HisKA_3#1
177-244 aa · 68 aa · 18.5% of protein
Raw token
HisKA_3:177:1.71e-19:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BCA_RS09615
Histidine kinase, Classic
Bacillus cereus 03BB102 · GCF_000022505
ClassHKTypeClassicLength368 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000022505#BCA_RS09615Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length368 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 368 aa (39.4%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa368 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
289-365 aa · 77 aa · 20.9% of protein
Raw token
HATPase_c:289:0.000000000776:365:97:109- Raw architecture: HisKA_3:177:1.71e-19:244:68:68#HATPase_c:289:0.000000000776:365:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000022505::NC_012472.1::G00023
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1661567-1663316Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBCA_1800RefSeq proteinWP_000397666.1
Context group ID
GCF_000022505::NC_012472.1::G00023Context members
BCA_RS09610BCA_RS09615
Partner locus tags
BCA_RS09610BCA_RS09615
Partner old locus tags
BCA_1799BCA_1800
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000397666.1Primary protein accession used for annex mappings.
UniProt accessionA0A158RQ65Primary UniProt accession resolved in the annex database.
UniProt IDA0A158RQ65_BACC3Display identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBCA_RS09615Primary locus identifier stored in the genes table.
Old locus tagBCA_1800Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_012472.1Sequence record reported by the local genomic context database.
Genomic interval1 662 210-1 663 316 nt1 107 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 661 567-1 663 316 ntGCF_000022505::NC_012472.1::G00023
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000022505::NC_012472.1::G00023Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_012472.1All displayed genes belong to this local TCS context.
Neighborhood span1 661 567-1 663 316 nt1 750 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 661 567 nt1 663 316 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BCA_RS09610GCF_000022505#BCA_RS09610
RRNarL
1 661 567-1 662 205 nt · Forward (+)
BCA_RS09615GCF_000022505#BCA_RS09615
HKClassicCurrent focus
1 662 210-1 663 316 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000022505#BCA_RS09615The current gene is the representative for this cluster.
PFAM architectureHisKA_31 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2698026
Simplified PFAM architecture for HKOC_2698026
PFAM domain coverage: 67 / 368 aa (18.2%)
1 aa368 aa
HisKA_3
- Simplified architecture: HisKA_3
- Raw architecture: HisKA_3[177-243]
- Domain count: 1
- Matched identifier: HKOC_2698026
- Positioned domains: HisKA_3 177-243
Cluster members and taxonomy
Representative gene: GCF_000022505#BCA_RS09615
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 572 264 · GCF_000022505
AssemblyASM2250v1 · Complete Genomehaploid
Genome composition5 449 308 bp · 35,5% GCBacillus cereus 03BB102
Signal transduction countsGenes 107 · HK 57 · RR 50CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key