1 HisKA_3#1
177-244 aa · 68 aa · 18.5% of protein
Raw token
HisKA_3:177:1.62e-19:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BALH_RS08915
Histidine kinase, Classic
Bacillus thuringiensis str. Al Hakam · GCF_000015065
ClassHKTypeClassicLength368 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000015065#BALH_RS08915Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length368 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 368 aa (39.4%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa368 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
289-365 aa · 77 aa · 20.9% of protein
Raw token
HATPase_c:289:0.00000000104:365:97:109- Raw architecture: HisKA_3:177:1.62e-19:244:68:68#HATPase_c:289:0.00000000104:365:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000015065::NC_008600.1::G00024
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1715006-1716755Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBALH_1575RefSeq proteinWP_000397667.1
Context group ID
GCF_000015065::NC_008600.1::G00024Context members
BALH_RS08910BALH_RS08915
Partner locus tags
BALH_RS08910BALH_RS08915
Partner old locus tags
BALH_1574BALH_1575
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000397667.1Primary protein accession used for annex mappings.
UniProt accessionA0AAN0W979Primary UniProt accession resolved in the annex database.
UniProt IDA0AAN0W979_BACCEDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBALH_RS08915Primary locus identifier stored in the genes table.
Old locus tagBALH_1575Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_008600.1Sequence record reported by the local genomic context database.
Genomic interval1 715 649-1 716 755 nt1 107 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 715 006-1 716 755 ntGCF_000015065::NC_008600.1::G00024
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000015065::NC_008600.1::G00024Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_008600.1All displayed genes belong to this local TCS context.
Neighborhood span1 715 006-1 716 755 nt1 750 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 715 006 nt1 716 755 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BALH_RS08910GCF_000015065#BALH_RS08910
RRNarL
1 715 006-1 715 644 nt · Forward (+)
BALH_RS08915GCF_000015065#BALH_RS08915
HKClassicCurrent focus
1 715 649-1 716 755 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000015065#BALH_RS08915The current gene is the representative for this cluster.
PFAM architectureHisKA_31 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2698011
Simplified PFAM architecture for HKOC_2698011
PFAM domain coverage: 67 / 368 aa (18.2%)
1 aa368 aa
HisKA_3
- Simplified architecture: HisKA_3
- Raw architecture: HisKA_3[177-243]
- Domain count: 1
- Matched identifier: HKOC_2698011
- Positioned domains: HisKA_3 177-243
Cluster members and taxonomy
Representative gene: GCF_000015065#BALH_RS08915
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 412 694 · GCF_000015065
AssemblyASM1506v1 · Complete Genomehaploid
Genome composition5 313 030 bp · 35,5% GCBacillus thuringiensis str. Al Hakam
Signal transduction countsGenes 110 · HK 58 · RR 52CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key