1 HisKA_3#1
177-244 aa · 68 aa · 18.5% of protein
Raw token
HisKA_3:177:7.61e-20:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BT9727_RS08860
Histidine kinase, Classic
[Bacillus thuringiensis] serovar konkukian str. 97-27 · GCF_000008505
ClassHKTypeClassicLength368 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000008505#BT9727_RS08860Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length368 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 368 aa (39.4%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa368 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
289-365 aa · 77 aa · 20.9% of protein
Raw token
HATPase_c:289:0.00000000103:365:97:109- Raw architecture: HisKA_3:177:7.61e-20:244:68:68#HATPase_c:289:0.00000000103:365:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000008505::NC_005957.1::G00024
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span1710681-1712430Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBT9727_1638RefSeq proteinWP_000397664.1
Context group ID
GCF_000008505::NC_005957.1::G00024Context members
BT9727_RS08855BT9727_RS08860
Partner locus tags
BT9727_RS08855BT9727_RS08860
Partner old locus tags
BT9727_1637BT9727_1638
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000397664.1Primary protein accession used for annex mappings.
UniProt accessionQ6HKF6Primary UniProt accession resolved in the annex database.
UniProt IDQ6HKF6_BACHKDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBT9727_RS08860Primary locus identifier stored in the genes table.
Old locus tagBT9727_1638Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_005957.1Sequence record reported by the local genomic context database.
Genomic interval1 711 324-1 712 430 nt1 107 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span1 710 681-1 712 430 ntGCF_000008505::NC_005957.1::G00024
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000008505::NC_005957.1::G00024Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_005957.1All displayed genes belong to this local TCS context.
Neighborhood span1 710 681-1 712 430 nt1 750 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 710 681 nt1 712 430 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
BT9727_RS08855GCF_000008505#BT9727_RS08855
RRNarL
1 710 681-1 711 319 nt · Forward (+)
BT9727_RS08860GCF_000008505#BT9727_RS08860
HKClassicCurrent focus
1 711 324-1 712 430 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000008505#BT9727_RS08860The current gene is the representative for this cluster.
PFAM architectureHisKA_31 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2697992
Simplified PFAM architecture for HKOC_2697992
PFAM domain coverage: 67 / 368 aa (18.2%)
1 aa368 aa
HisKA_3
- Simplified architecture: HisKA_3
- Raw architecture: HisKA_3[177-243]
- Domain count: 1
- Matched identifier: HKOC_2697992
- Positioned domains: HisKA_3 177-243
Cluster members and taxonomy
Representative gene: GCF_000008505#BT9727_RS08860
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 281 309 · GCF_000008505
AssemblyASM850v1 · Complete Genomehaploid
Genome composition5 314 794 bp · 35,5% GC[Bacillus thuringiensis] serovar konkukian str. 97-27
Signal transduction countsGenes 109 · HK 58 · RR 51CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key