1 HisKA#1
286-348 aa · 63 aa · 12.7% of protein
Raw token
HisKA:286:0.0000000000000137:348:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
BT9727_RS06730
Histidine kinase, Classic
[Bacillus thuringiensis] serovar konkukian str. 97-27 · GCF_000008505
ClassHKTypeClassicLength498 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000008505#BT9727_RS06730Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length498 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage167 / 498 aa (33.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa498 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
394-497 aa · 104 aa · 20.9% of protein
Raw token
HATPase_c:394:6.73e-29:497:107:109- Raw architecture: HisKA:286:0.0000000000000137:348:63:64#HATPase_c:394:6.73e-29:497:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000008505::NC_005957.1::G00016
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span1315122-1316618Genomic interval covered by the local TCS group.
Identifiers
Old locus tagBT9727_1225RefSeq proteinWP_000669134.1
Context group ID
GCF_000008505::NC_005957.1::G00016Context members
BT9727_RS06730
Partner locus tags
BT9727_RS06730
Partner old locus tags
BT9727_1225
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000669134.1Primary protein accession used for annex mappings.
UniProt accessionQ6HLL1Primary UniProt accession resolved in the annex database.
UniProt IDQ6HLL1_BACHKDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagBT9727_RS06730Primary locus identifier stored in the genes table.
Old locus tagBT9727_1225Legacy locus tag recovered from the local context mapping.
Contig / repliconNC_005957.1Sequence record reported by the local genomic context database.
Genomic interval1 315 122-1 316 618 nt1 497 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span1 315 122-1 316 618 ntGCF_000008505::NC_005957.1::G00016
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000008505::NC_005957.1::G00016Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNC_005957.1All displayed genes belong to this local TCS context.
Neighborhood span1 315 122-1 316 618 nt1 497 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
1 315 122 nt1 316 618 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
BT9727_RS06730GCF_000008505#BT9727_RS06730
HKClassicCurrent focus
1 315 122-1 316 618 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000008505#BT9727_RS06730The current gene is the representative for this cluster.
PFAM architectureDUF3149 + dCache_1 + HisKA + HATPase_c4 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1486980
Simplified PFAM architecture for HKOC_1486980
PFAM domain coverage: 338 / 498 aa (67.9%)
1 aa498 aa
DUF3149dCache_1HisKAHATPase_c
- Simplified architecture: DUF3149 + dCache_1 + HisKA + HATPase_c
- Raw architecture: DUF3149[1-38] | dCache_1[75-208] | HisKA[286-347] | HATPase_c[393-496]
- Domain count: 4
- Matched identifier: HKOC_1486980
- Positioned domains: DUF3149 1-38 ; dCache_1 75-208 ; HisKA 286-347 ; HATPase_c 393-496
Cluster members and taxonomy
Representative gene: GCF_000008505#BT9727_RS06730
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 281 309 · GCF_000008505
AssemblyASM850v1 · Complete Genomehaploid
Genome composition5 314 794 bp · 35,5% GC[Bacillus thuringiensis] serovar konkukian str. 97-27
Signal transduction countsGenes 109 · HK 58 · RR 51CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key