P2CS-Web
Two-component systems, rebuilt for exploration
Browse genomes
Genome-first entry point for species, lineage, and taxonomic selection.
This page now prefers a precomputed Krona view when it is available, while keeping the live URL-based taxonomy controls as fallback.
Current focus
The precomputed Krona panel, live taxonomy fallback, and genome table stay aligned where applicable.
No free-text search applied.
Taxonomy path: Bacteria / Pseudomonadati / Fibrobacterota
Total genomes returned: 94
Krona export not generated
The page keeps the live taxonomy fallback until the offline export has been prepared.
Run `apps/api/.venv/bin/python scripts/krona/export_genome_taxonomy.py` once to write the TSV into `DATAS/KRONA` and generate the HTML automatically if `ktImportText` is installed.
Krona-like taxonomy wheel
Concentric overview of the current browse scope. Click a sector to refine the genome selection.
Focus current: Bacteria / Pseudomonadati / Fibrobacterota
Grey segments aggregate lower-abundance values for: phylum. Use the textual selector below for exact navigation.
Superkingdom
Superkingdom
- Bacteria391017
- None1058
Kingdom
Kingdom
- Pseudomonadati239529
- Bacillati149968
- Fusobacteriati771
- Thermotogati687
- None62
Phylum
Phylum
- Fibrobacterota94
- Pseudomonadota204672
- Bacteroidota18939
- Campylobacterota10608
- Spirochaetota2115
- Thermodesulfobacteriota742
- Verrucomicrobiota576
- Chlamydiota538
- Planctomycetota253
- Myxococcota233
- Rhodothermota148
- Acidobacteriota133
- Other 28478
Class
Class
- Fibrobacteria93
- Chitinivibrionia1
Precise taxonomy selector
Exact rank-by-rank filtering, kept as a textual fallback under the radial overview.
Superkingdom
Superkingdom
Kingdom
Kingdom
Phylum
Phylum
Pseudomonadota204672Bacteroidota18939Campylobacterota10608Spirochaetota2115Thermodesulfobacteriota742Verrucomicrobiota576Chlamydiota538Planctomycetota253Myxococcota233Rhodothermota148Acidobacteriota133Fibrobacterota94Bdellovibrionota91Aquificota55Gemmatimonadota51Chlorobiota48Balneolota47Nitrospirota43Lentisphaerota25Deferribacterota22Ignavibacteriota13Candidatus Kryptoniota12Thermomicrobiota11Kiritimatiellota8Candidatus Cryosericota7Elusimicrobiota7Atribacterota6Dictyoglomota6Chrysiogenota4Coprothermobacterota4Nitrospinota4Thermodesulfobiota3Calditrichota2Candidatus Cloacimonadota2Candidatus Tectimicrobiota2Abditibacteriota1Caldisericota1Candidatus Omnitrophota1Fidelibacterota1Thermosulfidibacterota1
Class
Class
Genome table
Filtered genomes for Fibrobacterota (94 rows)
| Genome | Taxonomy / assembly | Counts / genome | Genome page |
|---|---|---|---|
| GCF_000474745 Genome name: Chitinivibrio alkaliphilus ACht1 Strain: ACht1 SAMN02469433 · PRJNA224116 | Unknown Contig · reference genome Assembly: Acht1_1 | Genes 83 / HK 44 / RR 37 / PP 2 2 591 328 bp · 46,0% GC | Open genome |
| GCF_937877005 Genome name: uncultured Fibrobacter sp. Strain: SRR6425803_bin.126_CONCOCT_v1.1_MAG SAMEA14076014 · PRJNA224116 | Unknown Contig Assembly: SRR6425803_bin.126_CONCOCT_v1.1_MAG | Genes 37 / HK 18 / RR 15 / PP 4 3 445 186 bp · 51,0% GC | Open genome |
| GCF_900142465 Genome name: Fibrobacter sp. UWH6 Strain: UWH6 SAMN05720765 · PRJNA224116 | Unknown Scaffold Assembly: IMG-taxon 2700988679 annotated assembly | Genes 36 / HK 24 / RR 10 / PP 2 3 921 019 bp · 49,0% GC | Open genome |
| GCF_900142535 Genome name: Fibrobacter sp. UWEL Strain: UWEL SAMN05720468 · PRJNA224116 | Unknown Contig Assembly: IMG-taxon 2700988688 annotated assembly | Genes 36 / HK 25 / RR 9 / PP 2 3 530 042 bp · 49,0% GC | Open genome |
| GCF_002210355 Genome name: Fibrobacter sp. UWH3 Strain: UWH3 SAMN06392822 · PRJNA224116 | Unknown Contig Assembly: ASM221035v1 | Genes 35 / HK 24 / RR 9 / PP 2 3 868 941 bp · 49,0% GC | Open genome |
| GCF_002210365 Genome name: Fibrobacter sp. UWH1 Strain: UWH1 SAMN06392821 · PRJNA224116 | Unknown Contig Assembly: ASM221036v1 | Genes 34 / HK 24 / RR 8 / PP 2 3 830 823 bp · 49,0% GC | Open genome |
| GCF_023373925 Genome name: Fibrobacter sp. HC4 Strain: HC4 SAMN26377323 · PRJNA224116 | Unknown Scaffold Assembly: ASM2337392v1 | Genes 34 / HK 24 / RR 8 / PP 2 3 748 246 bp · 49,0% GC | Open genome |
| GCF_900129715 Genome name: Fibrobacter sp. UWH9 Strain: UWH9 SAMN05720766 · PRJNA224116 | Unknown Contig Assembly: IMG-taxon 2700988686 annotated assembly | Genes 33 / HK 23 / RR 8 / PP 2 3 784 473 bp · 49,0% GC | Open genome |
| GCF_900142505 Genome name: Fibrobacter sp. UWH5 Strain: UWH5 SAMN05720764 · PRJNA224116 | Unknown Contig Assembly: IMG-taxon 2700988685 annotated assembly | Genes 33 / HK 23 / RR 8 / PP 2 3 736 655 bp · 49,0% GC | Open genome |
| GCF_946541775 Genome name: uncultured Fibrobacter sp. Strain: SRR873597_bin.49_metaWRAP_v1.3_MAG SAMEA110744836 · PRJNA224116 | Unknown Contig Assembly: SRR873597_bin.49_metaWRAP_v1.3_MAG | Genes 31 / HK 15 / RR 13 / PP 3 3 845 210 bp · 48,0% GC | Open genome |
| GCF_002210345 Genome name: Fibrobacter sp. UWB4 Strain: UWB4 SAMN06392819 · PRJNA224116 | Unknown Contig Assembly: ASM221034v1 | Genes 29 / HK 14 / RR 12 / PP 3 3 586 285 bp · 48,0% GC | Open genome |
| GCF_045112255 Genome name: Fibrobacter sp. Strain: ruminal_MAG_346 SAMN43293643 · PRJNA224116 | Unknown Contig Assembly: ASM4511225v1 | Genes 29 / HK 14 / RR 12 / PP 3 4 050 718 bp · 48,5% GC | Open genome |
| GCF_900215325 Genome name: Fibrobacter sp. UWB16 Strain: UWB16 SAMN06298224 · PRJNA224116 | Unknown Contig Assembly: IMG-taxon 2721755862 annotated assembly | Genes 29 / HK 15 / RR 11 / PP 3 3 555 739 bp · 48,5% GC | Open genome |
| GCF_946184285 Genome name: uncultured Fibrobacter sp. Strain: SRR11784282_bin.8_metaWRAP_v1.3_MAG SAMEA110586451 · PRJNA224116 | Unknown Contig Assembly: SRR11784282_bin.8_metaWRAP_v1.3_MAG | Genes 29 / HK 14 / RR 12 / PP 3 3 657 562 bp · 48,5% GC | Open genome |
| GCF_002394865 Genome name: Fibrobacter sp. UBA4297 Strain: UBA4297 SAMN06452659 · PRJNA224116 | Unknown Scaffold Assembly: ASM239486v1 | Genes 28 / HK 14 / RR 11 / PP 3 3 719 719 bp · 48,0% GC | Open genome |
| GCF_045221695 Genome name: Fibrobacter sp. Strain: ruminal_MAG_67 SAMN43293832 · PRJNA224116 | Unknown Contig Assembly: ASM4522169v1 | Genes 28 / HK 14 / RR 11 / PP 3 3 429 370 bp · 49,0% GC | Open genome |
| GCF_900142945 Genome name: Fibrobacter sp. UWB7 Strain: UWB7 SAMN05720467 · PRJNA224116 | Unknown Contig Assembly: IMG-taxon 2703719236 annotated assembly | Genes 28 / HK 14 / RR 11 / PP 3 3 812 257 bp · 48,0% GC | Open genome |
| GCF_900177805 Genome name: Fibrobacter sp. UWB13 Strain: UWB13 SAMN05720489 · PRJNA224116 | Unknown Scaffold Assembly: IMG-taxon 2716885052 annotated assembly | Genes 28 / HK 14 / RR 11 / PP 3 3 804 669 bp · 48,0% GC | Open genome |
| GCF_902780945 Genome name: Fibrobacter succinogenes Strain: RUG12625 SAMEA6150761 · PRJNA224116 | Unknown Scaffold Assembly: Rumen uncultured genome RUG12625 | Genes 28 / HK 13 / RR 12 / PP 3 3 533 533 bp · 48,5% GC | Open genome |
| GCF_946184545 Genome name: uncultured Fibrobacter sp. Strain: SRR11784279_bin.46_metaWRAP_v1.3_MAG SAMEA110586307 · PRJNA224116 | Unknown Contig Assembly: SRR11784279_bin.46_metaWRAP_v1.3_MAG | Genes 28 / HK 14 / RR 11 / PP 3 4 047 177 bp · 48,0% GC | Open genome |