P2CS-Web
Two-component systems, rebuilt for exploration
Browse genomes
Genome-first entry point for species, lineage, and taxonomic selection.
This page now prefers a precomputed Krona view when it is available, while keeping the live URL-based taxonomy controls as fallback.
Current focus
The precomputed Krona panel, live taxonomy fallback, and genome table stay aligned where applicable.
No free-text search applied.
Taxonomy path: Bacteria / Pseudomonadati / Bacteroidota
Total genomes returned: 18939
Krona export not generated
The page keeps the live taxonomy fallback until the offline export has been prepared.
Run `apps/api/.venv/bin/python scripts/krona/export_genome_taxonomy.py` once to write the TSV into `DATAS/KRONA` and generate the HTML automatically if `ktImportText` is installed.
Krona-like taxonomy wheel
Concentric overview of the current browse scope. Click a sector to refine the genome selection.
Focus current: Bacteria / Pseudomonadati / Bacteroidota
Grey segments aggregate lower-abundance values for: phylum. Use the textual selector below for exact navigation.
Superkingdom
Superkingdom
- Bacteria391017
- None1058
Kingdom
Kingdom
- Pseudomonadati239529
- Bacillati149968
- Fusobacteriati771
- Thermotogati687
- None62
Phylum
Phylum
- Bacteroidota18939
- Pseudomonadota204672
- Campylobacterota10608
- Spirochaetota2115
- Thermodesulfobacteriota742
- Verrucomicrobiota576
- Chlamydiota538
- Planctomycetota253
- Myxococcota233
- Rhodothermota148
- Acidobacteriota133
- Fibrobacterota94
- Other 28478
Class
Class
- Bacteroidia11639
- Flavobacteriia5213
- Cytophagia943
- Sphingobacteriia787
- Chitinophagia307
- Saprospiria47
- None3
Precise taxonomy selector
Exact rank-by-rank filtering, kept as a textual fallback under the radial overview.
Superkingdom
Superkingdom
Kingdom
Kingdom
Phylum
Phylum
Pseudomonadota204672Bacteroidota18939Campylobacterota10608Spirochaetota2115Thermodesulfobacteriota742Verrucomicrobiota576Chlamydiota538Planctomycetota253Myxococcota233Rhodothermota148Acidobacteriota133Fibrobacterota94Bdellovibrionota91Aquificota55Gemmatimonadota51Chlorobiota48Balneolota47Nitrospirota43Lentisphaerota25Deferribacterota22Ignavibacteriota13Candidatus Kryptoniota12Thermomicrobiota11Kiritimatiellota8Candidatus Cryosericota7Elusimicrobiota7Atribacterota6Dictyoglomota6Chrysiogenota4Coprothermobacterota4Nitrospinota4Thermodesulfobiota3Calditrichota2Candidatus Cloacimonadota2Candidatus Tectimicrobiota2Abditibacteriota1Caldisericota1Candidatus Omnitrophota1Fidelibacterota1Thermosulfidibacterota1
Class
Class
Genome table
Filtered genomes for Bacteroidota (18939 rows)
| Genome | Taxonomy / assembly | Counts / genome | Genome page |
|---|---|---|---|
| GCF_009754945 Genome name: Spirosoma arboris Strain: HMF4905 SAMN13425632 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM975494v1 | Genes 374 / HK 155 / RR 166 / PP 53 9 765 922 bp · 46,5% GC | Open genome |
| GCF_030068605 Genome name: Xanthocytophaga agilis Strain: BD1B2-1 SAMN35152402 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM3006860v1 | Genes 363 / HK 167 / RR 153 / PP 43 9 771 560 bp · 39,0% GC | Open genome |
| GCF_010233585 Genome name: Spirosoma endbachense Strain: I-24 SAMN13230919 · PRJNA224116 | Unknown Chromosome · reference genome Assembly: ASM1023358v1 | Genes 347 / HK 143 / RR 146 / PP 58 10 326 072 bp · 47,5% GC | Open genome |
| GCF_030068525 Genome name: Xanthocytophaga flavus Strain: YF14B1 SAMN35152309 · PRJNA224116 | Unknown Contig Assembly: ASM3006852v1 | Genes 344 / HK 163 / RR 140 / PP 41 9 485 478 bp · 39,0% GC | Open genome |
| GCF_030068545 Genome name: Xanthocytophaga flavus Strain: NT2B1 SAMN35152165 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM3006854v1 | Genes 329 / HK 153 / RR 135 / PP 41 9 545 365 bp · 39,0% GC | Open genome |
| GCF_900101885 Genome name: Dyadobacter soli Strain: DSM 25329 SAMN04487996 · PRJNA224116 | Unknown Scaffold · reference genome Assembly: IMG-taxon 2619619010 annotated assembly | Genes 328 / HK 136 / RR 157 / PP 35 8 744 781 bp · 50,5% GC | Open genome |
| GCF_029360705 Genome name: Paraflavitalea pollutisoli Strain: H1-2-19X SAMN33731656 · PRJNA224116 | Unknown Scaffold · reference genome Assembly: ASM2936070v1 | Genes 324 / HK 139 / RR 140 / PP 45 8 760 788 bp · 50,5% GC | Open genome |
| GCF_016735595 Genome name: Chryseolinea lacunae Strain: Jin1 SAMN17222006 · PRJNA224116 | Unknown Scaffold · reference genome Assembly: ASM1673559v1 | Genes 322 / HK 163 / RR 133 / PP 26 7 916 274 bp · 51,0% GC | Open genome |
| GCF_021190955 Genome name: Parachryseolinea silvisoli Strain: QH1ED-6-2 SAMN21154999 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM2119095v1 | Genes 322 / HK 150 / RR 144 / PP 28 7 945 725 bp · 51,5% GC | Open genome |
| GCF_018598225 Genome name: Chryseosolibacter histidini Strain: PWU4 SAMN19292108 · PRJNA224116 | Unknown Scaffold · reference genome Assembly: ASM1859822v1 | Genes 316 / HK 141 / RR 150 / PP 25 8 043 353 bp · 50,0% GC | Open genome |
| GCF_030068585 Genome name: Xanthocytophaga flavus Strain: DM2B3-1 SAMN35152347 · PRJNA224116 | Unknown Contig Assembly: ASM3006858v1 | Genes 315 / HK 151 / RR 125 / PP 39 9 558 922 bp · 39,0% GC | Open genome |
| GCF_002831565 Genome name: Spirosoma pollinicola Strain: Ha7 SAMN08109548 · PRJNA224116 | Unknown Complete Genome · reference genome Assembly: ASM283156v1 | Genes 314 / HK 145 / RR 142 / PP 27 8 794 837 bp · 48,0% GC | Open genome |
| GCF_900167975 Genome name: Ohtaekwangia koreensis Strain: DSM 25262 SAMN05660236 · PRJNA224116 | Unknown Scaffold · reference genome Assembly: IMG-taxon 2595698225 annotated assembly | Genes 303 / HK 153 / RR 122 / PP 28 7 241 272 bp · 42,0% GC | Open genome |
| GCF_026250525 Genome name: Chondrinema litorale Strain: WSW3-B12 SAMN31710250 · PRJNA224116 | Unknown Complete Genome · reference genome Assembly: ASM2625052v1 | Genes 302 / HK 148 / RR 122 / PP 32 10 142 296 bp · 34,0% GC | Open genome |
| GCF_042656925 Genome name: Rhodocytophaga aerolata Strain: CGMCC 4.7151 SAMN43282834 · PRJNA224116 | Unknown Scaffold Assembly: ASM4265692v1 | Genes 299 / HK 147 / RR 122 / PP 30 9 122 611 bp · 41,5% GC | Open genome |
| GCF_030503435 Genome name: Rhodocytophaga aerolata Strain: KACC 12507 SAMN36409693 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM3050343v1 | Genes 298 / HK 147 / RR 121 / PP 30 9 068 394 bp · 41,5% GC | Open genome |
| GCF_900109045 Genome name: Dyadobacter sp. SG02 Strain: SG02 SAMN05216327 · PRJNA224116 | Unknown Scaffold Assembly: IMG-taxon 2609459762 annotated assembly | Genes 297 / HK 122 / RR 147 / PP 28 8 481 454 bp · 50,0% GC | Open genome |
| GCF_003589925 Genome name: Chryseolinea soli Strain: KIS68-18 SAMN10059839 · PRJNA224116 | Unknown Complete Genome · reference genome Assembly: ASM358992v1 | Genes 296 / HK 146 / RR 120 / PP 30 8 241 389 bp · 51,0% GC | Open genome |
| GCF_042676245 Genome name: Ohtaekwangia kribbensis Strain: CCUG 58938 SAMN43284381 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM4267624v1 | Genes 296 / HK 147 / RR 121 / PP 28 7 397 999 bp · 44,0% GC | Open genome |
| GCF_022012415 Genome name: Terrimonas ginsenosidimutans Strain: NA20 SAMN24619033 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM2201241v1 | Genes 293 / HK 121 / RR 132 / PP 40 7 144 125 bp · 45,5% GC | Open genome |