CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Xanthomonas oryzae pv. oryzicola BLS256
 

Xanthomonas oryzae pv. oryzicola BLS256

Genome
 

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Total size (bp) 4831739
G + C content (%) 64.06
Coding sequences 4474
Coding density (%) 85.35
Average gene length (bp) 922
Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 133
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
61 21 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (45 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 27
Histidine Kinase, Hybrid 11
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (57) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 1CheY 12CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 6
NtrC 5OmpR 13PglZ 0PilB 0PleD 1
PleD_VieA 2PrrA 1RpfG 3RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 6
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(3)
HisKa 3
Hpt 0

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Date : 27 April 2024, 16:05:34 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales