CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Wolinella succinogenes DSM 1740
 

Wolinella succinogenes DSM 1740

Genome
 

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Total size (bp) 2110355
G + C content (%) 48.46
Coding sequences 2043
Coding density (%) 94.04
Average gene length (bp) 971
Histidine domain Logo
Mean spacer hisKA - HATPase domains 34
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 54
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
33 21 1 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (38 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 26
Histidine Kinase, Hybrid 10
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (42) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 4CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 0
NtrC 1OmpR 20PglZ 0PilB 0PleD 3
PleD_VieA 1PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 9
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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Date : 27 April 2024, 23:39:40 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales