CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Turneriella parva DSM 21527
 

Turneriella parva DSM 21527

Genome
 

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Total size (bp) 4384015
G + C content (%) 53.63
Coding sequences 4110
Coding density (%) 91.41
Average gene length (bp) 975
Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 38
Max spacer hisKA - HATPase domains 147
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
43 7 0 0 Pentad 1
Octad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (30 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 15
Histidine Kinase, Hybrid 13
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (35) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CyC-C Family CheB Family RpfG Family PleD Family VieA Family CheY Family unclassified Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 15CitT 0CsrA 0
CyC-C 2FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 6
NtrC 0OmpR 1PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 6
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(5)
HisKa 3
Hpt 2

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Date : 27 April 2024, 18:25:41 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales