CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Treponema brennaborense DSM 12168
 

Treponema brennaborense DSM 12168

Genome
 

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Total size (bp) 3055580
G + C content (%) 51.47
Coding sequences 2531
Coding density (%) 89.75
Average gene length (bp) 1084
Histidine domain Logo
Mean spacer hisKA - HATPase domains 34
Min spacer hisKA - HATPase domains 14
Max spacer hisKA - HATPase domains 103
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
19 15 0 0 0
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TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (22 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 17
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (26) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CyC-C Family YesN Family CheB Family RpfG Family AmiR_NasR Family CheY Family MerR Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family YesN Family CheB Family RpfG Family AmiR_NasR Family CheY Family MerR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 1NarL 3
NtrC 1OmpR 5PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 6unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 27 April 2024, 16:47:28 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales