CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Treponema azotonutricium ZAS-9
 

Treponema azotonutricium ZAS-9

Genome
 

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Total size (bp) 3855671
G + C content (%) 49.8
Coding sequences 3474
Coding density (%) 90.73
Average gene length (bp) 1007
Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 132
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
46 18 0 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (54 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 26
Histidine Kinase, Unorthodox 11
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (31) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family YesN Family CheB Family RpfG Family PleD Family CheY Family FrzZ Family unclassified Family NtrC Family OmpR Family NarL Family YesN Family CheB Family RpfG Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 6
NtrC 3OmpR 3PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 6RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 4unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 27 April 2024, 22:50:39 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales