CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Thiocystis violascens DSM 198
 

Thiocystis violascens DSM 198

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 5017071
G + C content (%) 62.61
Coding sequences 4330
Coding density (%) 85.37
Average gene length (bp) 989
Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 126
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
54 35 6 3 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (75 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 35
Histidine Kinase, Hybrid 18
Histidine Kinase, Unorthodox 15
Histidine Kinase, CheA 7
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (77) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 5
CheC 0CheV 1CheY 16CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 8
NtrC 5OmpR 9PglZ 0PilB 0PleD 4
PleD_VieA 9PrrA 1RpfG 8RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 3VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

Locations of visitors to this page
Date : 28 April 2024, 1:34:42 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales