CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Thiomonas sp. 3As
 

Thiomonas sp. 3As

Genome
 

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Total size (bp) 3738778
G + C content (%) 63.67
Coding sequences 3526
Coding density (%) 90.22
Average gene length (bp) 957
Histidine domain Logo
Mean spacer hisKA - HATPase domains 47
Min spacer hisKA - HATPase domains 37
Max spacer hisKA - HATPase domains 134
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
20 19 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (27 + 0) - Phylogenetic Tree - Data Heatmap
Classic CheA Classic CheA
Histidine Kinase, Classic 24
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (33) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family RpfG Family CheV Family AmiR_NasR Family CheY Family NtrC Family PrrA Family OmpR Family NarL Family RpfG Family CheV Family AmiR_NasR Family CheY Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 1CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 5
NtrC 5OmpR 13PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 2RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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Date : 27 April 2024, 23:21:14 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales