CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Thiomicrospira crunogena XCL-2
 

Thiomicrospira crunogena XCL-2

Genome
 

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Total size (bp) 2427734
G + C content (%) 43.13
Coding sequences 2196
Coding density (%) 89.9
Average gene length (bp) 994
Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 44
Max spacer hisKA - HATPase domains 60
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
22 11 0 0 0
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TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (21 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 10
Histidine Kinase, Hybrid 8
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (22) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 0CheV 2CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 4OmpR 4PglZ 0PilB 0PleD 1
PleD_VieA 1PrrA 1RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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Date : 28 April 2024, 1:09:00 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales